RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 MNAT1P51948 309 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 TMEM266Q2M3C6 531 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 CEP85LQ5SZL2 805 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 PPM1EQ8WY54 764 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 TSGA10Q9BZW7 698 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 KIAA1024Q9UPX6 916 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 CAPN7Q9Y6W3 813 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 A0A087X0T9 212 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 SMIM23A6NLE4 172 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 M0R2N6 131 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 CEP104O60308 925 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 BAG3O95817 575 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 FAM228BP0C875 321 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
PGBD1-201ENST00000259883 PRPF4BQ13523 1007 aaKnown RBP14.6□□□□□ -0.07
PGBD1-201ENST00000259883 ODF2Q5BJF6 829 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 KLHDC7AQ5VTJ3 777 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 TADA2BQ86TJ2 420 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 TSG101Q99816 390 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 IKZF4Q9H2S9 585 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 UTRNP46939 3433 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 EP400Q96L91 3159 aa14.6□□□□□ -0.07
PGBD1-201ENST00000259883 ANO9A1A5B4 782 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 TARSL2A2RTX5 802 aaKnown RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 KLHL30Q0D2K2 578 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 FAM83BQ5T0W9 1011 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 SFMBT2Q5VUG0 894 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 KAT2BQ92831 832 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 RNPC3Q96LT9 517 aaKnown RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 ERGIC2Q96RQ1 377 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 VIPAS39Q9H9C1 493 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 POTEB3A0JP26 581 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 PALM3A6NDB9 673 aaPredicted RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 POTECB2RU33 542 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 MYO1FO00160 1098 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 PPFIA1Q13136 1202 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 POTEBQ6S5H4 581 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 C7orf25Q9BPX7 421 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 SEPT11Q9NVA2 429 aaKnown RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 TCP1P17987 556 aaKnown RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 COPB2P35606 906 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 KCNMA1Q12791 1236 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 CFAP221Q4G0U5 840 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 DPP8Q6V1X1 898 aaPredicted RBP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 MYOCDQ8IZQ8 938 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 MXD3Q9BW11 206 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 PANK4Q9NVE7 773 aa14.59□□□□□ -0.07
PGBD1-201ENST00000259883 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
PGBD1-201ENST00000259883 TIAM2Q8IVF5 1701 aa14.58□□□□□ -0.07
PGBD1-201ENST00000259883 ITGB4P16144 1822 aa14.58□□□□□ -0.07
PGBD1-201ENST00000259883 SFI1A8K8P3 1242 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 TLR2O60603 784 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 INPP5BP32019 993 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 CYP4A11Q02928 519 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 SF3B3Q15393 1217 aaKnown RBP14.58□□□□□ -0.08
PGBD1-201ENST00000259883 PDXDC1Q6P996 788 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 GJB7Q6PEY0 223 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 RETREG2Q8NC44 543 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 UHMK1Q8TAS1 419 aaKnown RBP14.58□□□□□ -0.08
PGBD1-201ENST00000259883 SPAG5Q96R06 1193 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 ZMYND12Q9H0C1 365 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 UFL1O94874 794 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 PCP11498 1178 aaKnown RBP14.58□□□□□ -0.08
PGBD1-201ENST00000259883 EPHB4P54760 987 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 CENPPQ6IPU0 288 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 DDX47Q9H0S4 455 aaKnown RBP14.58□□□□□ -0.08
PGBD1-201ENST00000259883 DPH5Q9H2P9 285 aa14.58□□□□□ -0.08
PGBD1-201ENST00000259883 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.57□□□□□ -0.08
PGBD1-201ENST00000259883 C6orf229H3BNL8 230 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 OPA1O60313 960 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 ADCY7P51828 1080 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 COASYQ13057 564 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 FAM26FQ5R3K3 315 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 CASKIN2Q8WXE0 1202 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 BAP1Q92560 729 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 SH3GLB2Q9NR46 395 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 MYH14Q7Z406 1995 aaKnown RBP14.57□□□□□ -0.08
PGBD1-201ENST00000259883 E7EVH7 732 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 EIF3HO15372 352 aaKnown RBP eCLIP14.57□□□□□ -0.08
PGBD1-201ENST00000259883 RAD51CO43502 376 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 SLC9A1P19634 815 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
PGBD1-201ENST00000259883 MFSD14BQ5SR56 506 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 UNC13DQ70J99 1090 aa14.57□□□□□ -0.08
PGBD1-201ENST00000259883 CCDC84Q86UT8 332 aaPredicted RBP14.57□□□□□ -0.08
PGBD1-201ENST00000259883 IPO4Q8TEX9 1081 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms