RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 METP08581 1390 aa14.6□□□□□ -0.07
ALPK3-201ENST00000258888 BRD2P25440 801 aaKnown RBP14.6□□□□□ -0.07
ALPK3-201ENST00000258888 TRIP13Q15645 432 aaPredicted RBP14.6□□□□□ -0.07
ALPK3-201ENST00000258888 PAGE5Q96GU1 130 aa14.6□□□□□ -0.07
ALPK3-201ENST00000258888 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
ALPK3-201ENST00000258888 APBA3O96018 575 aa14.6□□□□□ -0.07
ALPK3-201ENST00000258888 ZNF577Q9BSK1 485 aa14.6□□□□□ -0.07
ALPK3-201ENST00000258888 SHROOM2Q13796 1616 aa14.6□□□□□ -0.07
ALPK3-201ENST00000258888 PSMC2P35998 433 aaKnown RBP14.59□□□□□ -0.07
ALPK3-201ENST00000258888 DCAF15Q66K64 600 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 APOL6Q9BWW8 343 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 ECEL1O95672 775 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 PDE1BQ01064 536 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 SEMA3EO15041 775 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 USP17L8P0C7I0 530 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 ECE1P42892 770 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 CSRNP1Q96S65 589 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 DYNLT1P63172 113 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 PLCB4Q15147 1175 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 SPOUT1Q5T280 376 aaKnown RBP14.59□□□□□ -0.07
ALPK3-201ENST00000258888 GPATCH4Q5T3I0 446 aaKnown RBP14.59□□□□□ -0.07
ALPK3-201ENST00000258888 ARID5BQ14865 1188 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 KRT31Q15323 416 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 PCIF1Q9H4Z3 704 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
ALPK3-201ENST00000258888 COA7Q96BR5 231 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 EFCAB6Q5THR3 1501 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 SPDYE16A6NNV3 312 aaPredicted RBP14.59□□□□□ -0.07
ALPK3-201ENST00000258888 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
ALPK3-201ENST00000258888 TCP11Q8WWU5 503 aa14.58□□□□□ -0.07
ALPK3-201ENST00000258888 HDAC11Q96DB2 347 aa14.58□□□□□ -0.07
ALPK3-201ENST00000258888 COG7P83436 770 aa14.58□□□□□ -0.07
ALPK3-201ENST00000258888 FKBP3Q00688 224 aaKnown RBP14.58□□□□□ -0.07
ALPK3-201ENST00000258888 NNTQ13423 1086 aa14.58□□□□□ -0.07
ALPK3-201ENST00000258888 NCAPG2Q86XI2 1143 aa14.58□□□□□ -0.07
ALPK3-201ENST00000258888 ZNF277Q9NRM2 450 aaPredicted RBP14.58□□□□□ -0.07
ALPK3-201ENST00000258888 OATP04181 439 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 PEX19P40855 299 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 FBXO38Q6PIJ6 1188 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 KRT1P04264 644 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 SLC7A5Q01650 507 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 MMEL1Q495T6 779 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 FAM160B1Q5W0V3 765 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 WDR46O15213 610 aaKnown RBP14.58□□□□□ -0.08
ALPK3-201ENST00000258888 CLRN2A0PK11 232 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 GDAP1Q8TB36 358 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 PANX2Q96RD6 677 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 STK17AQ9UEE5 414 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 ANAPC5Q9UJX4 755 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 CDK12Q9NYV4 1490 aaPredicted RBP14.58□□□□□ -0.08
ALPK3-201ENST00000258888 SCYL3Q8IZE3 742 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 PCDHA13Q9Y5I0 950 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
ALPK3-201ENST00000258888 NDUFA10O95299 355 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 KIF11P52732 1056 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 MRPS25P82663 173 aaKnown RBP14.58□□□□□ -0.08
ALPK3-201ENST00000258888 ATP6V0A1Q93050 837 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 Q9H521 79 aa14.58□□□□□ -0.08
ALPK3-201ENST00000258888 LMNB2Q03252 620 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 E2F5Q15329 346 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 C4orf50Q6ZRC1 276 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 ENOX1Q8TC92 643 aaKnown RBP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 CCDC68Q9H2F9 335 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 TBK1Q9UHD2 729 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 CDKL2Q92772 493 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 ACCSQ96QU6 501 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 UBE2TQ9NPD8 197 aaPredicted RBP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 GARSP41250 739 aaKnown RBP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 ERFEQ4G0M1 354 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 THAP9Q9H5L6 903 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 ZBED6P86452 979 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 TCP11X2Q5H9J9 407 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 IFNAR1P17181 557 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 LUC7L3O95232 432 aaKnown RBP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 RASGRF1Q13972 1273 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 KMT5BQ4FZB7 885 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 RNF168Q8IYW5 571 aaPredicted RBP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 KMT5AQ9NQR1 393 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 ACTN1P12814 892 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 FAM133BQ5BKY9 247 aaKnown RBP14.57□□□□□ -0.08
ALPK3-201ENST00000258888 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 TOGARAM2Q6ZUX3 1019 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 MAP7D3Q8IWC1 876 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 AP1M1Q9BXS5 423 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 USP17L3A6NCW0 530 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 USP17L4A6NCW7 530 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 USP17L1Q7RTZ2 530 aa14.57□□□□□ -0.08
ALPK3-201ENST00000258888 PIK3R5Q8WYR1 880 aa14.56□□□□□ -0.08
ALPK3-201ENST00000258888 SPDL1Q96EA4 605 aa14.56□□□□□ -0.08
ALPK3-201ENST00000258888 NRBP2Q9NSY0 501 aa14.56□□□□□ -0.08
ALPK3-201ENST00000258888 ATP8B1O43520 1251 aa14.56□□□□□ -0.08
ALPK3-201ENST00000258888 SKA2Q8WVK7 121 aaPredicted RBP14.56□□□□□ -0.08
ALPK3-201ENST00000258888 TRIM11Q96F44 468 aa14.56□□□□□ -0.08
ALPK3-201ENST00000258888 USH1CQ9Y6N9 552 aa14.56□□□□□ -0.08
ALPK3-201ENST00000258888 CACYBPQ9HB71 228 aaKnown RBP14.56□□□□□ -0.08
ALPK3-201ENST00000258888 TFAMQ00059 246 aaKnown RBP14.56□□□□□ -0.08
ALPK3-201ENST00000258888 CCDC151A5D8V7 595 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms