RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 C19orf81C9J6K1 198 aa30.96■■■□□ 2.55
CCM2-201ENST00000258781 HOXA7P31268 230 aaPredicted RBP30.96■■■□□ 2.55
CCM2-201ENST00000258781 CCT6AP40227 531 aaKnown RBP30.96■■■□□ 2.55
CCM2-201ENST00000258781 ARMC9Q7Z3E5 817 aa30.96■■■□□ 2.55
CCM2-201ENST00000258781 FCHSD1Q86WN1 690 aa30.96■■■□□ 2.55
CCM2-201ENST00000258781 C17orf53Q8N3J3 647 aaPredicted RBP30.96■■■□□ 2.55
CCM2-201ENST00000258781 CCZ1BP86790 482 aa30.95■■■□□ 2.55
CCM2-201ENST00000258781 CCZ1P86791 482 aaPredicted RBP30.95■■■□□ 2.55
CCM2-201ENST00000258781 PDE4DQ08499 809 aa30.95■■■□□ 2.55
CCM2-201ENST00000258781 COBLL1Q53SF7 1204 aa30.95■■■□□ 2.55
CCM2-201ENST00000258781 APTXQ7Z2E3 356 aaKnown RBP30.95■■■□□ 2.55
CCM2-201ENST00000258781 RBBP6Q7Z6E9 1792 aaKnown RBP30.95■■■□□ 2.55
CCM2-201ENST00000258781 MYMKA6NI61 221 aa30.95■■■□□ 2.54
CCM2-201ENST00000258781 PSMA7O14818 248 aa30.95■■■□□ 2.54
CCM2-201ENST00000258781 SPAG1Q07617 926 aa30.95■■■□□ 2.54
CCM2-201ENST00000258781 SPIRE1Q08AE8 756 aa30.95■■■□□ 2.54
CCM2-201ENST00000258781 OTUD5Q96G74 571 aa30.95■■■□□ 2.54
CCM2-201ENST00000258781 DHTKD1Q96HY7 919 aaPredicted RBP30.95■■■□□ 2.54
CCM2-201ENST00000258781 ZNF536O15090 1300 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 IRF6O14896 467 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 SFPQP23246 707 aaKnown RBP eCLIP30.94■■■□□ 2.54
CCM2-201ENST00000258781 ZNF76P36508 570 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 NR1I3Q14994 352 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 LDLRAD1Q5T700 205 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 ARMCX5Q6P1M9 558 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 UNC13DQ70J99 1090 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 TBC1D5Q92609 795 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 CCPG1Q9ULG6 757 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 LOC285556D6RIA3 1793 aa30.94■■■□□ 2.54
CCM2-201ENST00000258781 SPDYE5A6NIY4 337 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 SKILP12757 684 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 ECM1Q16610 540 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 HAUS3Q68CZ6 603 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 KCNK18Q7Z418 384 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 ERO1BQ86YB8 467 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 FLOT1O75955 427 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 PPATQ06203 517 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 SH3D19Q5HYK7 790 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 ERMNQ8TAM6 284 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 PNMA2Q9UL42 364 aa30.93■■■□□ 2.54
CCM2-201ENST00000258781 COL11A1P12107 1806 aaPredicted RBP30.92■■■□□ 2.54
CCM2-201ENST00000258781 IGLV3-22A0A075B6J6 115 aa30.92■■■□□ 2.54
CCM2-201ENST00000258781 MSH4O15457 936 aa30.92■■■□□ 2.54
CCM2-201ENST00000258781 HSD17B4P51659 736 aa30.92■■■□□ 2.54
CCM2-201ENST00000258781 LIMA1Q9UHB6 759 aaKnown RBP30.92■■■□□ 2.54
CCM2-201ENST00000258781 MAPK8IP1Q9UQF2 711 aa30.92■■■□□ 2.54
CCM2-201ENST00000258781 GHRHRQ02643 423 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 RBM46Q8TBY0 533 aaKnown RBP30.91■■■□□ 2.54
CCM2-201ENST00000258781 AGBL1Q96MI9 1066 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 SLC38A10Q9HBR0 1119 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 ADD3Q9UEY8 706 aaKnown RBP30.91■■■□□ 2.54
CCM2-201ENST00000258781 PPP1R9AQ9ULJ8 1098 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 FDX1P10109 184 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 FILIP1LQ4L180 1135 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 TMOD4Q9NZQ9 345 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 RABGAP1Q9Y3P9 1069 aa30.91■■■□□ 2.54
CCM2-201ENST00000258781 NRDCO43847 1150 aa30.9■■■□□ 2.54
CCM2-201ENST00000258781 TBX2Q13207 712 aaPredicted RBP30.9■■■□□ 2.54
CCM2-201ENST00000258781 SPECC1LQ69YQ0 1117 aa30.9■■■□□ 2.54
CCM2-201ENST00000258781 ANKRD20A12PQ8NF67 263 aa30.9■■■□□ 2.54
CCM2-201ENST00000258781 OPTNQ96CV9 577 aa30.9■■■□□ 2.54
CCM2-201ENST00000258781 LRRC10BA6NIK2 292 aa30.89■■■□□ 2.54
CCM2-201ENST00000258781 STAT3P40763 770 aa30.89■■■□□ 2.54
CCM2-201ENST00000258781 MCF2L2Q86YR7 1114 aa30.89■■■□□ 2.54
CCM2-201ENST00000258781 NOC3LQ8WTT2 800 aaKnown RBP30.89■■■□□ 2.54
CCM2-201ENST00000258781 WNK4Q96J92 1243 aa30.89■■■□□ 2.54
CCM2-201ENST00000258781 VAV3Q9UKW4 847 aa30.89■■■□□ 2.54
CCM2-201ENST00000258781 BICDL2A1A5D9 508 aa30.89■■■□□ 2.53
CCM2-201ENST00000258781 STK4Q13043 487 aa30.89■■■□□ 2.53
CCM2-201ENST00000258781 SAMD3Q8N6K7 520 aa30.89■■■□□ 2.53
CCM2-201ENST00000258781 KIAA1024Q9UPX6 916 aa30.89■■■□□ 2.53
CCM2-201ENST00000258781 TRPM7Q96QT4 1865 aa30.88■■■□□ 2.53
CCM2-201ENST00000258781 CELF2O95319 508 aaKnown RBP30.88■■■□□ 2.53
CCM2-201ENST00000258781 ITGBL1O95965 494 aaPredicted RBP30.88■■■□□ 2.53
CCM2-201ENST00000258781 CCNE1P24864 410 aa30.88■■■□□ 2.53
CCM2-201ENST00000258781 DDX12PQ92771 950 aa30.88■■■□□ 2.53
CCM2-201ENST00000258781 UIMC1Q96RL1 719 aa30.88■■■□□ 2.53
CCM2-201ENST00000258781 THAP9Q9H5L6 903 aa30.88■■■□□ 2.53
CCM2-201ENST00000258781 POTEB3A0JP26 581 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 COBLO75128 1261 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 RPA1P27694 616 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 PSMD2Q13200 908 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 PPIL2Q13356 520 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 TCP11X2Q5H9J9 407 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 TREML2Q5T2D2 321 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 NCAPH2Q6IBW4 605 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 TTI2Q6NXR4 508 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 POTEBQ6S5H4 581 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 CCDC112Q8NEF3 446 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 CYP2W1Q8TAV3 490 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 CLEC4DQ8WXI8 215 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 P2RX5Q93086 422 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 GBA2Q9HCG7 927 aaPredicted RBP30.87■■■□□ 2.53
CCM2-201ENST00000258781 A0A0G2JLL6 359 aaPredicted RBP30.87■■■□□ 2.53
CCM2-201ENST00000258781 MED24O75448 989 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 GJA5P36382 358 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 KCNJ6P48051 423 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 KRT31Q15323 416 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 DYMQ7RTS9 669 aa30.87■■■□□ 2.53
CCM2-201ENST00000258781 PRRT2Q7Z6L0 340 aaPredicted RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms