RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CLIC2O15247 247 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 USP17L24Q0WX57 530 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 NAALADL2Q58DX5 795 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 RCSD1Q6JBY9 416 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 USP17L6PQ6QN14 398 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 CLEC4GQ6UXB4 293 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 UNC13DQ70J99 1090 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 DAAM2Q86T65 1068 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 CCDC25Q86WR0 208 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 IRF2BP1Q8IU81 584 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 U2AF1L4Q8WU68 220 aaKnown RBP5.22□□□□□ -1.57
USP44-201ENST00000258499 DNAJC7Q99615 494 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 SELENOSQ9BQE4 189 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 TMEM51Q9NW97 253 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 MAD2L2Q9UI95 211 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 CAPN7Q9Y6W3 813 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 CAMTA1Q9Y6Y1 1673 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 CYTH3O43739 400 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 FAM13AO94988 1023 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 MYBL2P10244 700 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 SSR1P43307 286 aaKnown RBP5.22□□□□□ -1.57
USP44-201ENST00000258499 APBA1Q02410 837 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 SF3B3Q15393 1217 aaKnown RBP5.22□□□□□ -1.57
USP44-201ENST00000258499 ARHGAP44Q17R89 818 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 DOK7Q18PE1 504 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 KRT71Q3SY84 523 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 MUM1L1Q5H9M0 696 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 FAM83BQ5T0W9 1011 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 WDR59Q6PJI9 974 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 TMED8Q6PL24 325 aaPredicted RBP5.22□□□□□ -1.57
USP44-201ENST00000258499 CPLX4Q7Z7G2 160 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 DNAAF5Q86Y56 855 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 ZNF622Q969S3 477 aaKnown RBP eCLIP5.22□□□□□ -1.57
USP44-201ENST00000258499 DUSP9Q99956 384 aaKnown RBP5.22□□□□□ -1.57
USP44-201ENST00000258499 EHD4Q9H223 541 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 RBM12Q9NTZ6 932 aaKnown RBP5.22□□□□□ -1.57
USP44-201ENST00000258499 USP40Q9NVE5 1235 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 KBTBD4Q9NVX7 518 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 STK17AQ9UEE5 414 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 DNM3Q9UQ16 869 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 PCDHA1Q9Y5I3 950 aa5.22□□□□□ -1.57
USP44-201ENST00000258499 NPHP3-ACAD11A0A0J9YXS1 232 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 POTEB3A0JP26 581 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 SFI1A8K8P3 1242 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 POTECB2RU33 542 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 GOLGA8KD6RF30 607 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 GCOM1H8Y6P7 765 aaPredicted RBP5.21□□□□□ -1.57
USP44-201ENST00000258499 KRIT1O00522 736 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 HGSO14964 777 aaPredicted RBP5.21□□□□□ -1.57
USP44-201ENST00000258499 MYZAPP0CAP1 466 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 EPB41P11171 864 aaKnown RBP5.21□□□□□ -1.57
USP44-201ENST00000258499 XRCC5P13010 732 aaKnown RBP5.21□□□□□ -1.57
USP44-201ENST00000258499 RASA1P20936 1047 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 CTNNA1P35221 906 aaKnown RBP5.21□□□□□ -1.57
USP44-201ENST00000258499 TTBK2Q6IQ55 1244 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 POTEBQ6S5H4 581 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 LRRC31Q6UY01 552 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 CEP57Q86XR8 500 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 CCDC114Q96M63 670 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 ARHGAP20Q9P2F6 1191 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 ZBTB21Q9ULJ3 1066 aa5.21□□□□□ -1.57
USP44-201ENST00000258499 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.21□□□□□ -1.57
USP44-201ENST00000258499 ZSCAN5CA6NGD5 496 aaPredicted RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 EPHB6O15197 1021 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 GABBR2O75899 941 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 FLOT1O75955 427 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 PRPF6O94906 941 aaKnown RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 PLA2G4BP0C869 781 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 STAT3P40763 770 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 CARSP49589 748 aaKnown RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 CACNB3P54284 484 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 LRRC63Q05C16 580 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 COASYQ13057 564 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 NPY5RQ15761 445 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 EXOC3L4Q17RC7 722 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 WDR93Q6P2C0 686 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 CCDC121Q6ZUS5 278 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 LINC00116Q8NCU8 138 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 GLIS3Q8NEA6 775 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 CTNNBL1Q8WYA6 563 aaPredicted RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 TNFRSF25Q93038 417 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 SEMA6BQ9H3T3 888 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 SH2D4AQ9H788 454 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 EMILIN3Q9NT22 766 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 TSKSQ9UJT2 592 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 CTDP1Q9Y5B0 961 aaPredicted RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 FAM169AQ9Y6X4 670 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 LMO7Q8WWI1 1683 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 BACH1O14867 736 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 SLC37A4O43826 429 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 MAGEA9P43362 315 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 CYP2J2P51589 502 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 GUCY1A3Q02108 690 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 IFT88Q13099 833 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 ZYXQ15942 572 aaKnown RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 TBC1D10BQ4KMP7 808 aaPredicted RBP5.21□□□□□ -1.58
USP44-201ENST00000258499 SBK1Q52WX2 424 aa5.21□□□□□ -1.58
USP44-201ENST00000258499 HAUS3Q68CZ6 603 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms