RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 LAMB1P07942 1786 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 IRF2BP1Q8IU81 584 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 TPH2Q8IWU9 490 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 C10orf67Q8IYJ2 551 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 P2RX5Q93086 422 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 AK8Q96MA6 479 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 MTMR9Q96QG7 549 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 NYAP2Q9P242 653 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 GUCA1BQ9UMX6 200 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 SMCHD1A6NHR9 2005 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 TRIM66O15016 1216 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 FAM86B2P0C5J1 330 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 CASQ1P31415 396 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 RASSF7Q02833 373 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 RASA3Q14644 834 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 TRIM10Q9UDY6 481 aa16.28■□□□□ 0.2
TRAFD1-201ENST00000257604 MEIS2O14770 477 aa16.27■□□□□ 0.2
TRAFD1-201ENST00000257604 PRPHP41219 470 aa16.27■□□□□ 0.2
TRAFD1-201ENST00000257604 SP4Q02446 784 aa16.27■□□□□ 0.2
TRAFD1-201ENST00000257604 ZNF569Q5MCW4 686 aa16.27■□□□□ 0.2
TRAFD1-201ENST00000257604 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 H7C1D1 291 aa16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 ELOA2Q8IYF1 753 aaPredicted RBP16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 GIMAP8Q8ND71 665 aaPredicted RBP16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 SMCR8Q8TEV9 937 aaPredicted RBP16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 PIM2Q9P1W9 311 aa16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.19
TRAFD1-201ENST00000257604 WNT10BO00744 389 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 MFAP3LO75121 409 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 MED24O75448 989 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 DNA2P51530 1060 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 EHD4Q9H223 541 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 PANK4Q9NVE7 773 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 CCDC175P0C221 793 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 APBA1Q02410 837 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 CCDC40Q4G0X9 1142 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 CNNM4Q6P4Q7 775 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 RAD54LQ92698 747 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 GDAP1L1Q96MZ0 367 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 SEMA6BQ9H3T3 888 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 NLRC4Q9NPP4 1024 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 LCMT1Q9UIC8 334 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 LUC7L2Q9Y383 392 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 SAMM50Q9Y512 469 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 RHOXF2BP0C7M4 288 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 ALAS1P13196 640 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 RHOXF2Q9BQY4 288 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 PARD6BQ9BYG5 372 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 IKZF4Q9H2S9 585 aa16.26■□□□□ 0.19
TRAFD1-201ENST00000257604 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 STX10O60499 249 aa16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 PLA2G4BP0C869 781 aa16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 TBX2Q13207 712 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 CC2D1AQ6P1N0 951 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 EFCAB8A8MWE9 144 aa16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 SPAG1Q07617 926 aa16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
TRAFD1-201ENST00000257604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■■■ 76.5
TRAFD1-201ENST00000257604 CCNE1P24864 410 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 KIF4BQ2VIQ3 1234 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 TCERG1LQ5VWI1 586 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 CIAPIN1Q6FI81 312 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 TTI2Q6NXR4 508 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 RSPH10B2B2RC85 870 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 ENC1O14682 589 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 RSPH10BP0C881 870 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 KCNA3P22001 575 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 CNGA4Q8IV77 575 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 MB21D1Q8N884 522 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 RABEP2Q9H5N1 569 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 N4BP1O75113 896 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 ENTPD3O75355 529 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 ERVK-24P63145 666 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
TRAFD1-201ENST00000257604 CCP110O43303 1012 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms