RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SFNP31947 248 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 POLR2FP61218 127 aaKnown RBP16.44■□□□□ 0.22
UBE4B-201ENST00000253251 QRICH1Q2TAL8 776 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 FAM151AQ8WW52 585 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 INCENPQ9NQS7 918 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 CALCOCO1Q9P1Z2 691 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 SAR1BQ9Y6B6 198 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 GYS1P13807 737 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 CA8P35219 290 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 ZHX2Q9Y6X8 837 aa16.44■□□□□ 0.22
UBE4B-201ENST00000253251 CEP104O60308 925 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 NMT2O60551 498 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 STXBP2Q15833 593 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 PROM2Q8N271 834 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 MYRIPQ8NFW9 859 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 TRIM11Q96F44 468 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 A6NNZ2 444 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 DDIT3P35638 169 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 PRELPP51888 382 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 TUBB8Q3ZCM7 444 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 SEPT14Q6ZU15 432 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 ADGRF4Q8IZF3 695 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 GAS8O95995 478 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 FGFR2P21802 821 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 KMT5BQ4FZB7 885 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 PPP1R14CQ8TAE6 165 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 WDR64B1ANS9 1081 aa16.43■□□□□ 0.22
UBE4B-201ENST00000253251 EIF2AK2P19525 551 aaKnown RBP16.43■□□□□ 0.22
UBE4B-201ENST00000253251 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
UBE4B-201ENST00000253251 PAK2Q13177 524 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-201ENST00000253251 IVLP07476 585 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-201ENST00000253251 ZNF543Q08ER8 600 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 SLFN12LQ6IEE8 588 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 PARP2Q9UGN5 583 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 SSX2IPQ9Y2D8 614 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 U2AF2P26368 475 aaKnown RBP eCLIP16.42■□□□□ 0.228e-7■■■□□ 18.1
UBE4B-201ENST00000253251 HOXA13P31271 388 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-201ENST00000253251 PTK2Q05397 1052 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 RMDN3Q96TC7 470 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 HAUS2Q9NVX0 235 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 TXNDC16Q9P2K2 825 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 SEL1LQ9UBV2 794 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 GABPB2Q8TAK5 448 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-201ENST00000253251 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
UBE4B-201ENST00000253251 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE4B-201ENST00000253251 V9GYY5 206 aaPredicted RBP16.42■□□□□ 0.22
UBE4B-201ENST00000253251 STAMBPO95630 424 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 FAM47CQ5HY64 1035 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 C10orf76Q5T2E6 689 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 CDC42EP5Q6NZY7 148 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.41■□□□□ 0.22
UBE4B-201ENST00000253251 COMMD10Q9Y6G5 202 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
UBE4B-201ENST00000253251 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
UBE4B-201ENST00000253251 CASP7P55210 303 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 MTMR1Q13613 665 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 TKFCQ3LXA3 575 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 CCDC170Q8IYT3 715 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 CACTINQ8WUQ7 758 aaKnown RBP16.41■□□□□ 0.22
UBE4B-201ENST00000253251 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 HESX1Q9UBX0 185 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 ZBED6P86452 979 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 CCDC127Q96BQ5 260 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 RAB17Q9H0T7 212 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 ERCC3P19447 782 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 LRMPQ12912 555 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 FASTKD5Q7L8L6 764 aaKnown RBP16.41■□□□□ 0.22
UBE4B-201ENST00000253251 VSTM4Q8IW00 320 aa16.41■□□□□ 0.22
UBE4B-201ENST00000253251 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
UBE4B-201ENST00000253251 PDIA5Q14554 519 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 DLATP10515 647 aaKnown RBP16.4■□□□□ 0.22
UBE4B-201ENST00000253251 NEDD9Q14511 834 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 KCTD17Q8N5Z5 321 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 CEP63Q96MT8 703 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 ERICH4A6NGS2 130 aa16.4■□□□□ 0.22
UBE4B-201ENST00000253251 SPP2Q13103 211 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms