RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 FAM151AQ8WW52 585 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 LENG9Q96B70 501 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 PCMTD1Q96MG8 357 aaPredicted RBP24.12■■□□□ 1.45
CLN6-201ENST00000249806 VEZTQ9HBM0 779 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 TBC1D7Q9P0N9 293 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 DPEP1P16444 411 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 SPIRE1Q08AE8 756 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 MOXD1Q6UVY6 613 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 CYP2W1Q8TAV3 490 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 PSMD1Q99460 953 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 FGFBP2Q9BYJ0 223 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 CNTNAP1P78357 1384 aa24.12■■□□□ 1.45
CLN6-201ENST00000249806 TADA3O75528 432 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 NDUFA10O95299 355 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 MMP14P50281 582 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 CBX1P83916 185 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 MIGA2Q7L4E1 593 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 UBXN4Q92575 508 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 HDAC9Q9UKV0 1011 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 REXO2Q9Y3B8 237 aaKnown RBP24.11■■□□□ 1.45
CLN6-201ENST00000249806 POTEFA5A3E0 1075 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 POTEIP0CG38 1075 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 SREBF1P36956 1147 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 ARHGAP25P42331 645 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 STAT2P52630 851 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 FAM83BQ5T0W9 1011 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 POTEGQ6S5H5 508 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 POTEEQ6S8J3 1075 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 TMEM39BQ9GZU3 492 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 ARHGEF10LQ9HCE6 1279 aa24.11■■□□□ 1.45
CLN6-201ENST00000249806 BMP2KQ9NSY1 1161 aaPredicted RBP24.11■■□□□ 1.45
CLN6-201ENST00000249806 LRRC63Q05C16 580 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 TSR1Q2NL82 804 aaKnown RBP24.1■■□□□ 1.45
CLN6-201ENST00000249806 Q4G0T1 1027 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 CATSPER3Q86XQ3 398 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 MYOCDQ8IZQ8 938 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 NUP58Q9BVL2 599 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 TMX2Q9Y320 296 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 FOSP01100 380 aaPredicted RBP24.1■■□□□ 1.45
CLN6-201ENST00000249806 SPDYE2Q495Y8 402 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 VWA3BQ502W6 1294 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 FAM26FQ5R3K3 315 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 GPBP1Q86WP2 473 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 TBC1D5Q92609 795 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 ERGIC2Q96RQ1 377 aa24.1■■□□□ 1.45
CLN6-201ENST00000249806 EFCAB8A8MWE9 144 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 CYP11B2P19099 503 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 PSMC6P62333 389 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 PPP2R3AQ06190 1150 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 ZYXQ15942 572 aaKnown RBP24.09■■□□□ 1.45
CLN6-201ENST00000249806 FKBP15Q5T1M5 1219 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 NCAPH2Q6IBW4 605 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 LRRC55Q6ZSA7 311 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 NDST4Q9H3R1 872 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 ZBTB21Q9ULJ3 1066 aa24.09■■□□□ 1.45
CLN6-201ENST00000249806 MEIS1O00470 390 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 ARSHQ5FYA8 562 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 SLC35F6Q8N357 371 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 RETREG2Q8NC44 543 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 TRIM10Q9UDY6 481 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 GRIPAP1Q4V328 841 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 MCTP2Q6DN12 878 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 DEFB132Q7Z7B7 95 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 EPC1Q9H2F5 836 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 TFR2Q9UP52 801 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 PCDHA2Q9Y5H9 948 aa24.08■■□□□ 1.45
CLN6-201ENST00000249806 MSH4O15457 936 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 SLC12A3P55017 1021 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 ZBED6P86452 979 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 MEA1Q16626 185 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 HERC4Q5GLZ8 1057 aaPredicted RBP24.07■■□□□ 1.44
CLN6-201ENST00000249806 CCDC174Q6PII3 467 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
CLN6-201ENST00000249806 TBX3O15119 743 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 SPATA31C1P0DKV0 1188 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 H2AFXP16104 143 aaPredicted RBP24.07■■□□□ 1.44
CLN6-201ENST00000249806 SAMD1Q6SPF0 538 aaPredicted RBP24.07■■□□□ 1.44
CLN6-201ENST00000249806 GOPCQ9HD26 462 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 SYNPO2Q9UMS6 1093 aa24.07■■□□□ 1.44
CLN6-201ENST00000249806 FGFR1OPO95684 399 aaKnown RBP24.06■■□□□ 1.44
CLN6-201ENST00000249806 CFBP00751 764 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 CIITAP33076 1130 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 MAN2A1Q16706 1144 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 HAUS3Q68CZ6 603 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 NELFCDQ8IXH7 590 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 CCDC65Q8IXS2 484 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 FEZ1Q99689 392 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 TSG101Q99816 390 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 EPHB6O15197 1021 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 ZNF76P36508 570 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 ZCWPW2Q504Y3 356 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 SLC30A10Q6XR72 485 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 ZHX3Q9H4I2 956 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 FAM207AQ9NSI2 230 aaPredicted RBP24.06■■□□□ 1.44
CLN6-201ENST00000249806 SIK3Q9Y2K2 1263 aa24.06■■□□□ 1.44
CLN6-201ENST00000249806 PIK3CDO00329 1044 aa24.05■■□□□ 1.44
CLN6-201ENST00000249806 TRAF5O00463 557 aa24.05■■□□□ 1.44
CLN6-201ENST00000249806 HERVK_113P62684 666 aa24.05■■□□□ 1.44
CLN6-201ENST00000249806 PABPC4Q13310 644 aaKnown RBP eCLIP24.05■■□□□ 1.446e-9■■■□□ 15.4
CLN6-201ENST00000249806 KIF4BQ2VIQ3 1234 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms