RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SCRN1Q12765 414 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 NEDD9Q14511 834 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 CELF3Q5SZQ8 465 aaKnown RBP27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 SLC43A3Q8NBI5 491 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 BICD2Q8TD16 824 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 AFG1LQ8WV93 481 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 UPF2Q9HAU5 1272 aaKnown RBP27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 RTEL1Q9NZ71 1219 aa27.87■■■□□ 2.05
SDF2L1-201ENST00000248958 MAFGO15525 162 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 MMP3P08254 477 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 CHRDL2Q6WN34 429 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 PPTC7Q8NI37 304 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 GPRASP2Q96D09 838 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 ZFP91Q96JP5 570 aaPredicted RBP27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 SENP7Q9BQF6 1050 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 ANO3Q9BYT9 981 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 C22orf23Q9BZE7 217 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 PDLIM7Q9NR12 457 aa27.86■■■□□ 2.05
SDF2L1-201ENST00000248958 GGPS1O95749 300 aa27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 UBA1P22314 1058 aaKnown RBP27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 BMP8BP34820 402 aa27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 DGKDQ16760 1214 aa27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 MYSM1Q5VVJ2 828 aa27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 GIMAP8Q8ND71 665 aaPredicted RBP27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 GDF15Q99988 308 aa27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 LBHD1Q9BQE6 289 aaPredicted RBP27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 MLXIPQ9HAP2 919 aa27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 PRDM5Q9NQX1 630 aaPredicted RBP27.85■■■□□ 2.05
SDF2L1-201ENST00000248958 SCN10AQ9Y5Y9 1956 aa27.84■■■□□ 2.05
SDF2L1-201ENST00000248958 RBM25P49756 843 aaKnown RBP27.84■■■□□ 2.05
SDF2L1-201ENST00000248958 SP2Q02086 613 aa27.84■■■□□ 2.05
SDF2L1-201ENST00000248958 FAM126BQ8IXS8 530 aa27.84■■■□□ 2.05
SDF2L1-201ENST00000248958 COLQQ9Y215 455 aaPredicted RBP27.84■■■□□ 2.05
SDF2L1-201ENST00000248958 UBIAD1Q9Y5Z9 338 aa27.84■■■□□ 2.05
SDF2L1-201ENST00000248958 FAAP100Q0VG06 881 aa27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 REXO1Q8N1G1 1221 aaKnown RBP27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 IL27Q8NEV9 243 aa27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 PRO3102Q9H379 93 aa27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 TMEM39AQ9NV64 488 aa27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 STK36Q9NRP7 1315 aa27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 LTBP2Q14767 1821 aa27.83■■■□□ 2.05
SDF2L1-201ENST00000248958 KIAA0355O15063 1070 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 PPFIA3O75145 1194 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 PPFIA4O75335 1185 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 SREBF1P36956 1147 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 MAGEA10P43363 369 aaPredicted RBP27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 PSMC6P62333 389 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 SEMA3FQ13275 785 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 HABP4Q5JVS0 413 aaKnown RBP27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 SPATA33Q96N06 139 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 KATNAL1Q9BW62 490 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 JADE2Q9NQC1 790 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 TMEM260Q9NX78 707 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 VPS54Q9P1Q0 977 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 GRIN2DO15399 1336 aa27.82■■■□□ 2.04
SDF2L1-201ENST00000248958 A0A1W2PPC1 479 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 HOXD8P13378 290 aaPredicted RBP27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 ITGB5P18084 799 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 NLRP5P59047 1200 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 PTPN11Q06124 597 aaPredicted RBP27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 ME3Q16798 604 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 JAKMIP3Q5VZ66 844 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 NFRKBQ6P4R8 1299 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 METTL7BQ6UX53 244 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 MXRA8Q9BRK3 442 aa27.81■■■□□ 2.04
SDF2L1-201ENST00000248958 CEP290O15078 2479 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 CD4P01730 458 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 XBP1P17861 261 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 MTMR1Q13613 665 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 GALNT17Q6IS24 598 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 GTF3C6Q969F1 213 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 PGBD1Q96JS3 809 aa27.8■■■□□ 2.04
SDF2L1-201ENST00000248958 TRIM43BA6NCK2 446 aa27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 RAG1P15918 1043 aa27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 HSDL1Q3SXM5 330 aa27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 SH3RF1Q7Z6J0 888 aa27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 WASF1Q92558 559 aa27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 TRIM43Q96BQ3 446 aaPredicted RBP27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 LIMCH1Q9UPQ0 1083 aa27.79■■■□□ 2.04
SDF2L1-201ENST00000248958 DOCK5Q9H7D0 1870 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 NOP56O00567 594 aaKnown RBP27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 CYP3A4P08684 503 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 SUPT20HL2P0C7V6 817 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 ARHGAP4P98171 946 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 MDM2Q00987 491 aaPredicted RBP27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 NBPF20Q3BBV1 942 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 CYFIP1Q7L576 1253 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 KIF2CQ99661 725 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 TBX21Q9UL17 535 aa27.78■■■□□ 2.04
SDF2L1-201ENST00000248958 ZNF76P36508 570 aa27.77■■■□□ 2.04
SDF2L1-201ENST00000248958 CEP55Q53EZ4 464 aa27.77■■■□□ 2.04
SDF2L1-201ENST00000248958 NIPA1Q7RTP0 329 aa27.77■■■□□ 2.04
SDF2L1-201ENST00000248958 PCDHA4Q9UN74 947 aa27.77■■■□□ 2.04
SDF2L1-201ENST00000248958 F2P00734 622 aa27.76■■■□□ 2.03
SDF2L1-201ENST00000248958 DAGLBQ8NCG7 672 aa27.76■■■□□ 2.03
SDF2L1-201ENST00000248958 CRYGNQ8WXF5 182 aa27.76■■■□□ 2.03
SDF2L1-201ENST00000248958 UBE2OQ9C0C9 1292 aaKnown RBP27.76■■■□□ 2.03
SDF2L1-201ENST00000248958 GTF3C3Q9Y5Q9 886 aa27.76■■■□□ 2.03
SDF2L1-201ENST00000248958 DNAH12Q6ZR08 3092 aa27.76■■■□□ 2.03
SDF2L1-201ENST00000248958 SORBS3O60504 671 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms