RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 FRMPD2Q68DX3 1309 aaPredicted RBP22.18■■□□□ 1.14
CACTIN-202ENST00000248420 SF3B3Q15393 1217 aaKnown RBP22.18■■□□□ 1.14
CACTIN-202ENST00000248420 CALCRLQ16602 461 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 SOGA3Q5TF21 947 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 UNC13DQ70J99 1090 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 CAVIN3Q969G5 261 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 C6orf50Q9HD87 102 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 MYH14Q7Z406 1995 aaKnown RBP22.18■■□□□ 1.14
CACTIN-202ENST00000248420 MNAT1P51948 309 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 IRX3P78415 501 aaPredicted RBP22.18■■□□□ 1.14
CACTIN-202ENST00000248420 FAM83BQ5T0W9 1011 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 MAATS1Q7Z4T9 603 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 IQCKQ8N0W5 287 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 LSM14BQ9BX40 385 aaKnown RBP22.18■■□□□ 1.14
CACTIN-202ENST00000248420 MAGEF1Q9HAY2 307 aa22.18■■□□□ 1.14
CACTIN-202ENST00000248420 NOL4O94818 638 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 LSP1P33241 339 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 RAPGEF1Q13905 1077 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 CCDC40Q4G0X9 1142 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 TBC1D9BQ66K14 1250 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 SNX29Q8TEQ0 813 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 A0A087X0T9 212 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 FAM228BP0C875 321 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 EPB41P11171 864 aaKnown RBP22.17■■□□□ 1.14
CACTIN-202ENST00000248420 RASA1P20936 1047 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 DDX42Q86XP3 938 aaKnown RBP eCLIP22.17■■□□□ 1.14
CACTIN-202ENST00000248420 FAM133AQ8N9E0 248 aa22.17■■□□□ 1.14
CACTIN-202ENST00000248420 PJA2O43164 708 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 KIAA0753Q2KHM9 967 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 GALNT17Q6IS24 598 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 REXO1Q8N1G1 1221 aaKnown RBP22.16■■□□□ 1.14
CACTIN-202ENST00000248420 GPATCH11Q8N954 259 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 GDF3Q9NR23 364 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 BACH1O14867 736 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 RAD51CO43502 376 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 EIF6P56537 245 aaKnown RBP22.16■■□□□ 1.14
CACTIN-202ENST00000248420 SKOR1P84550 965 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 SLC9C1Q4G0N8 1177 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 ZNF652Q9Y2D9 606 aa22.16■■□□□ 1.14
CACTIN-202ENST00000248420 USP17L5A8MUK1 530 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 H0YHG0 523 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 HLTFQ14527 1009 aaKnown RBP eCLIP22.15■■□□□ 1.14
CACTIN-202ENST00000248420 SFMBT2Q5VUG0 894 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 GUF1Q8N442 669 aaKnown RBP22.15■■□□□ 1.14
CACTIN-202ENST00000248420 SEC63Q9UGP8 760 aaKnown RBP22.15■■□□□ 1.14
CACTIN-202ENST00000248420 NPHP3-ACAD11A0A0J9YXS1 232 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 GNA11P29992 359 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 CEP85LQ5SZL2 805 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 RNF187Q5TA31 235 aaPredicted RBP22.15■■□□□ 1.14
CACTIN-202ENST00000248420 OTUD6BQ8N6M0 293 aa22.15■■□□□ 1.14
CACTIN-202ENST00000248420 PPANQ9NQ55 473 aaKnown RBP22.15■■□□□ 1.14
CACTIN-202ENST00000248420 EDIL3O43854 480 aa22.14■■□□□ 1.14
CACTIN-202ENST00000248420 LDHBP07195 334 aaKnown RBP22.14■■□□□ 1.14
CACTIN-202ENST00000248420 NR1D1P20393 614 aa22.14■■□□□ 1.14
CACTIN-202ENST00000248420 CLEC10AQ8IUN9 316 aa22.14■■□□□ 1.14
CACTIN-202ENST00000248420 EYA3Q99504 573 aa22.14■■□□□ 1.14
CACTIN-202ENST00000248420 HDLBPQ00341 1268 aaKnown RBP22.14■■□□□ 1.13
CACTIN-202ENST00000248420 NAA35Q5VZE5 725 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 PLAAQ9Y263 795 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.13
CACTIN-202ENST00000248420 MYH1P12882 1939 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 PAK2Q13177 524 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 ANKS1AQ92625 1134 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 MTMR9Q96QG7 549 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 AP1M1Q9BXS5 423 aa22.14■■□□□ 1.13
CACTIN-202ENST00000248420 SRP68Q9UHB9 627 aaKnown RBP22.14■■□□□ 1.13
CACTIN-202ENST00000248420 CASZ1Q86V15 1759 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 KCNK3O14649 394 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 ACTN1P12814 892 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 TNNI2P48788 182 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 UBE2SQ16763 222 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 RAD54LQ92698 747 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 CEP95Q96GE4 821 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 BCCIPQ9P287 314 aaKnown RBP eCLIP22.13■■□□□ 1.13
CACTIN-202ENST00000248420 PHLPP1O60346 1717 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 KIAA0754O94854 1291 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 ZHX3Q9H4I2 956 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 COL4A3BPQ9Y5P4 624 aa22.13■■□□□ 1.13
CACTIN-202ENST00000248420 LOC102724159A0A0B4J2E5 919 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 PPP1R2P41236 205 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 PWP2Q15269 919 aaKnown RBP22.12■■□□□ 1.13
CACTIN-202ENST00000248420 MCTP2Q6DN12 878 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 MYOCDQ8IZQ8 938 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 E7EVH7 732 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 IBSPP21815 317 aaPredicted RBP22.12■■□□□ 1.13
CACTIN-202ENST00000248420 CDK8P49336 464 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 LRRC63Q05C16 580 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 NAB2Q15742 525 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 DDB1Q16531 1140 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 RNF10Q8N5U6 811 aaKnown RBP22.12■■□□□ 1.13
CACTIN-202ENST00000248420 MARCH10Q8NA82 808 aaPredicted RBP22.12■■□□□ 1.13
CACTIN-202ENST00000248420 ZNF473Q8WTR7 871 aaKnown RBP22.12■■□□□ 1.13
CACTIN-202ENST00000248420 TSG101Q99816 390 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 ANKIB1Q9P2G1 1089 aa22.12■■□□□ 1.13
CACTIN-202ENST00000248420 PVALEFA0A1B0GWK0 134 aa22.11■■□□□ 1.13
CACTIN-202ENST00000248420 SSU72P8A0A1W2PR75 194 aa22.11■■□□□ 1.13
CACTIN-202ENST00000248420 GRID2IPA4D2P6 1211 aa22.11■■□□□ 1.13
CACTIN-202ENST00000248420 SERPING1P05155 500 aa22.11■■□□□ 1.13
CACTIN-202ENST00000248420 KLHL30Q0D2K2 578 aa22.11■■□□□ 1.13
CACTIN-202ENST00000248420 COASYQ13057 564 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms