RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
TREM1-201ENST00000244709 ZNF296Q8WUU4 475 aaPredicted RBP13□□□□□ -0.33
TREM1-201ENST00000244709 CLIC6Q96NY7 704 aa13□□□□□ -0.33
TREM1-201ENST00000244709 INPP4AQ96PE3 977 aaPredicted RBP13□□□□□ -0.33
TREM1-201ENST00000244709 APBA2Q99767 749 aa13□□□□□ -0.33
TREM1-201ENST00000244709 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
TREM1-201ENST00000244709 GABRQQ9UN88 632 aa13□□□□□ -0.33
TREM1-201ENST00000244709 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
TREM1-201ENST00000244709 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 MARCH6O60337 910 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 EIF3JO75822 258 aaKnown RBP12.99□□□□□ -0.33
TREM1-201ENST00000244709 PRPHP41219 470 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 PRKCZQ05513 592 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 SEMA3FQ13275 785 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 CCL14Q16627 93 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
TREM1-201ENST00000244709 ARL6IP4Q66PJ3 421 aaKnown RBP12.99□□□□□ -0.33
TREM1-201ENST00000244709 MAMDC4Q6UXC1 1216 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
TREM1-201ENST00000244709 GPRASP2Q96D09 838 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 KCNH7Q9NS40 1196 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 FLRT1Q9NZU1 646 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 PKD2L1Q9P0L9 805 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 TBX3O15119 743 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 TXKP42681 527 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 DTHD1Q6ZMT9 781 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 SLC5A5Q92911 643 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 FERMT2Q96AC1 680 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 TINF2Q9BSI4 451 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 ZNF577Q9BSK1 485 aa12.99□□□□□ -0.33
TREM1-201ENST00000244709 AGO4Q9HCK5 861 aaKnown RBP12.99□□□□□ -0.33
TREM1-201ENST00000244709 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
TREM1-201ENST00000244709 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 SYNGAP1Q96PV0 1343 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 DDX11L8A8MPP1 907 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 CUTAO60888 179 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 TECP42680 631 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 FLT3LGP49771 235 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 GNPTABQ3T906 1256 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
TREM1-201ENST00000244709 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
TREM1-201ENST00000244709 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
TREM1-201ENST00000244709 ATP9AO75110 1047 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
TREM1-201ENST00000244709 ICAM3P32942 547 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
TREM1-201ENST00000244709 ITGB3BPQ13352 177 aaPredicted RBP12.97□□□□□ -0.33
TREM1-201ENST00000244709 OLFML2BQ68BL8 750 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 MSL3Q8N5Y2 521 aaKnown RBP12.97□□□□□ -0.33
TREM1-201ENST00000244709 CDHR1Q96JP9 859 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 SRRDQ9UH36 339 aa12.97□□□□□ -0.33
TREM1-201ENST00000244709 GOLGA6L4A6NEF3 574 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 POTEMA6NI47 508 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 MAFGO15525 162 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 PSMD10O75832 226 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 XRCC5P13010 732 aaKnown RBP12.96□□□□□ -0.33
TREM1-201ENST00000244709 KCNA2P16389 499 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 UBE2HP62256 183 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 SHC4Q6S5L8 630 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 PDGFCQ9NRA1 345 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 VAV3Q9UKW4 847 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 PCDHA12Q9UN75 941 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 WDR81Q562E7 1941 aa12.96□□□□□ -0.33
TREM1-201ENST00000244709 A0A1W2PQ27 194 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 A0A1W2PQ64 194 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 A0A1W2PQD8 194 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 DDX39AO00148 427 aaKnown RBP12.96□□□□□ -0.34
TREM1-201ENST00000244709 DHX15O43143 795 aaKnown RBP12.96□□□□□ -0.34
TREM1-201ENST00000244709 GAS7O60861 476 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 ARIH2O95376 493 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 IGHA2P01877 340 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 HOXD10P28358 340 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 CYP2C19P33261 490 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 LONP1P36776 959 aaKnown RBP12.96□□□□□ -0.34
TREM1-201ENST00000244709 SP2Q02086 613 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 RESP18Q5W5W9 173 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 USP49Q70CQ1 688 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 IGSF22Q8N9C0 903 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.34
TREM1-201ENST00000244709 TRIB2Q92519 343 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 TEKT3Q9BXF9 490 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 GOLPH3LQ9H4A5 285 aa12.96□□□□□ -0.34
TREM1-201ENST00000244709 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.34
TREM1-201ENST00000244709 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
TREM1-201ENST00000244709 CHMP2AO43633 222 aa12.95□□□□□ -0.34
TREM1-201ENST00000244709 SORBS3O60504 671 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms