RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 SLC7A5Q01650 507 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 TCP10Q12799 353 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 STIM2Q9P246 746 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 MAGEC2Q9UBF1 373 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 NENFQ9UMX5 172 aa13.25□□□□□ -0.29
SEC61A1-201ENST00000243253 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 GNAQP50148 359 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 SNAP25P60880 206 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 MAN2A1Q16706 1144 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 MREGQ8N565 214 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 FGFBP2Q9BYJ0 223 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 ATXN2Q99700 1313 aaKnown RBP13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 NNTQ13423 1086 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 C16orf86Q6ZW13 317 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 NEK8Q86SG6 692 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 OLIG1Q8TAK6 271 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 CCDC42Q96M95 316 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 KLRF2D3W0D1 207 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 FAM153BP0C7A2 387 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 PPFIA1Q13136 1202 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 FAM153CQ494X1 144 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 EDEM3Q9BZQ6 932 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 FAM153AQ9UHL3 310 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 PCDHGC5Q9Y5F6 944 aa13.24□□□□□ -0.29
SEC61A1-201ENST00000243253 UFL1O94874 794 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 LDHBP07195 334 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 CXCR5P32302 372 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 SLC16A2P36021 539 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 SLC1A4P43007 532 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 ASIC1P78348 528 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 EMBQ6PCB8 327 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 CD302Q8IX05 232 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 TBCKQ8TEA7 893 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 SYN2Q92777 582 aaPredicted RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 MS4A14Q96JA4 679 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 TCP1P17987 556 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 TNNI2P48788 182 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 EPHB4P54760 987 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 EFCAB13Q8IY85 973 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 RNF10Q8N5U6 811 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 C1orf131Q8NDD1 294 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 TMEM260Q9NX78 707 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 HYOU1Q9Y4L1 999 aa13.23□□□□□ -0.29
SEC61A1-201ENST00000243253 GOLGA6CA6NDK9 693 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 GOLGA6DP0CG33 693 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 SNHG28P0DPA3 235 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 TAL1P17542 331 aaPredicted RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 NONOQ15233 471 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 FAM207AQ9NSI2 230 aaPredicted RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 GOLGA6AQ9NYA3 693 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 GOLGA8KD6RF30 607 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 ZEB2O60315 1214 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 MTIF2P46199 727 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 LRRC41Q15345 812 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 CCDC96Q2M329 555 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 HYIQ5T013 277 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 RAD54LQ92698 747 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 HAS1Q92839 578 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■■□ 25.3
SEC61A1-201ENST00000243253 ZNHIT6Q9NWK9 470 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 STK17AQ9UEE5 414 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 SCAF8Q9UPN6 1271 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 PDIA5Q14554 519 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 TRADDQ15628 312 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 MEI1Q5TIA1 1274 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.293e-10■■■□□ 17.5
SEC61A1-201ENST00000243253 ZNF622Q969S3 477 aaKnown RBP eCLIP13.22□□□□□ -0.298e-7■□□□□ 8.4
SEC61A1-201ENST00000243253 COA7Q96BR5 231 aa13.22□□□□□ -0.29
SEC61A1-201ENST00000243253 C15orf52Q6ZUT6 534 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 NEDD1Q8NHV4 660 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 PPP1R11O60927 126 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 TACC1O75410 805 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 FNTAP49354 379 aa13.21□□□□□ -0.29
SEC61A1-201ENST00000243253 NAB2Q15742 525 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms