RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 PCYT1AP49585 367 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TFAP4Q01664 338 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 GRAMD1BQ3KR37 738 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ZNF449Q6P9G9 518 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 SLC35F6Q8N357 371 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 GIPC2Q8TF65 315 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ATP6V1E2Q96A05 226 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TSC22D3Q99576 134 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 PCDHA1Q9Y5I3 950 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 LARGE2Q8N3Y3 721 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 CHEK2O96017 543 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MT-ND3P03897 115 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 KRT39Q6A163 491 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 NRBP1Q9UHY1 535 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 RWDD2AQ9UIY3 292 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 PCDHB4Q9Y5E5 795 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 LRRIQ4A6NIV6 560 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ALCAMQ13740 583 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TEX12Q9BXU0 123 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ZBBXA8MT70 800 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 SYNGAP1Q96PV0 1343 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TOM1L1O75674 476 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 KRT37O76014 449 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MCF2P10911 925 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 IL1RL1Q01638 556 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 SLC39A14Q15043 492 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ZYXQ15942 572 aaKnown RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 RAPH1Q70E73 1250 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 EEF2KMTQ96G04 330 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TAF5LO75529 589 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 AFPP02771 609 aaKnown RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 PYGLP06737 847 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ATICP31939 592 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ICA1Q05084 483 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 KAZNQ674X7 775 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 DNAJC24Q6P3W2 148 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 FBXL13Q8NEE6 735 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 GDAP1Q8TB36 358 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 CCDC127Q96BQ5 260 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 NUDCD1Q96RS6 583 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MRPL40Q9NQ50 206 aaKnown RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 XPAP23025 273 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TSTA3Q13630 321 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MAN2A1Q16706 1144 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TEKT3Q9BXF9 490 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MRPL47Q9HD33 250 aaKnown RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 IQANK1A0A1B0GTG1 560 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MED7O43513 233 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 KRT1P04264 644 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 E2F5Q15329 346 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 DCAF15Q66K64 600 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 ARMCX5Q6P1M9 558 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 C4orf50Q6ZRC1 276 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 VSTM4Q8IW00 320 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 EDC3Q96F86 508 aaKnown RBP7.29□□□□□ -1.24
CSMD2-201ENST00000241312 CHMP6Q96FZ7 201 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 SYF2O95926 243 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 RPSAP08865 295 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 GCFC2P16383 781 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 RSRC2Q7L4I2 434 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PCGF5Q86SE9 256 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 MYLK4Q86YV6 388 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ZNF233A6NK53 670 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 ENC1O14682 589 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PNMA6AP0CW24 399 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 PRPF38AQ8NAV1 312 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 POLR3CQ9BUI4 534 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 MLH3Q9UHC1 1453 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 IL13P35225 146 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 MYO1EQ12965 1108 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TAF1BQ53T94 588 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TRMT10CQ7L0Y3 403 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 GAS2L3Q86XJ1 694 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 KCTD6Q8NC69 237 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 NCKAP5LQ9HCH0 1330 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TADA3O75528 432 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 RAP1GDS1P52306 607 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 THAP9Q9H5L6 903 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 KLRF2D3W0D1 207 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 F8W8V4 182 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 MAPK13O15264 365 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 XPOTO43592 962 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 FKBP3Q00688 224 aaKnown RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TCP10Q12799 353 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 MESDQ14696 234 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 CDC37Q16543 378 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 SLFNL1Q499Z3 407 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 FAM186BQ8IYM0 893 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 VPS39Q96JC1 886 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 CEP19Q96LK0 163 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 RPS6KC1Q96S38 1066 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 RNF26Q9BY78 433 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-201ENST00000241312 FAM96AQ9H5X1 160 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 GUCY2CP25092 1073 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TCP11X2Q5H9J9 407 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 NAA35Q5VZE5 725 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 GRAMD4Q6IC98 578 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 TADA2BQ86TJ2 420 aa7.28□□□□□ -1.24
CSMD2-201ENST00000241312 SLC7A3Q8WY07 619 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms