RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PPP1R13BQ96KQ4 1090 aa25.95■■□□□ 1.74
MSX2-201ENST00000239243 DUSP9Q99956 384 aaKnown RBP25.95■■□□□ 1.74
MSX2-201ENST00000239243 PLA2G4BP0C869 781 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 RPA1P27694 616 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 EHHADHQ08426 723 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 NCAPH2Q6IBW4 605 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 FOXR2Q6PJQ5 311 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 ZSCAN12O43309 604 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 PRELPP51888 382 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 GOLGA8FQ08AF8 430 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 GOLGA8DPQ0D2H9 430 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 ANKRD40Q6AI12 368 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 DNAJC19Q96DA6 116 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 PNMA2Q9UL42 364 aa25.94■■□□□ 1.74
MSX2-201ENST00000239243 IGLV3-22A0A075B6J6 115 aa25.93■■□□□ 1.74
MSX2-201ENST00000239243 FGFR1OPO95684 399 aaKnown RBP25.93■■□□□ 1.74
MSX2-201ENST00000239243 STAT3P40763 770 aa25.93■■□□□ 1.74
MSX2-201ENST00000239243 USP14P54578 494 aa25.93■■□□□ 1.74
MSX2-201ENST00000239243 CCDC65Q8IXS2 484 aa25.93■■□□□ 1.74
MSX2-201ENST00000239243 CCPG1Q9ULG6 757 aa25.93■■□□□ 1.74
MSX2-201ENST00000239243 LGALS16A8MUM7 142 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 E9PMD0 336 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 MED24O75448 989 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 SSBP05455 408 aaKnown RBP eCLIP25.92■■□□□ 1.74
MSX2-201ENST00000239243 INPP5BP32019 993 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 LRRC63Q05C16 580 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 RBL2Q08999 1139 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 SAMD1Q6SPF0 538 aaPredicted RBP25.92■■□□□ 1.74
MSX2-201ENST00000239243 SMCHD1A6NHR9 2005 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 A0A1W2PQC6 194 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 MFAP3LO75121 409 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 UBXN1Q04323 297 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 PANK4Q9NVE7 773 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 VAV3Q9UKW4 847 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 PITPNM2Q9BZ72 1349 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 ZNF541Q9H0D2 1346 aa25.92■■□□□ 1.74
MSX2-201ENST00000239243 DYNC1I1O14576 645 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 GTF2F1P35269 517 aaKnown RBP eCLIP25.91■■□□□ 1.74
MSX2-201ENST00000239243 DOCK1Q14185 1865 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 CATSPER3Q86XQ3 398 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 MCF2L2Q86YR7 1114 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 TBC1D5Q92609 795 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 UIMC1Q96RL1 719 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 DNM3Q9UQ16 869 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 ASTN2O75129 1339 aaPredicted RBP25.91■■□□□ 1.74
MSX2-201ENST00000239243 SETQ01105 290 aaPredicted RBP25.91■■□□□ 1.74
MSX2-201ENST00000239243 COASYQ13057 564 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 NBPF12Q5TAG4 269 aaPredicted RBP25.91■■□□□ 1.74
MSX2-201ENST00000239243 HPS3Q969F9 1004 aa25.91■■□□□ 1.74
MSX2-201ENST00000239243 GOLGA6L9A6NEM1 432 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 DNM2P50570 870 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 GPBP1Q86WP2 473 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 NLGN2Q8NFZ4 835 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 POLR3CQ9BUI4 534 aaPredicted RBP25.9■■□□□ 1.74
MSX2-201ENST00000239243 SEMA6BQ9H3T3 888 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 AS3MTQ9HBK9 375 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 KIF20AO95235 890 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 GYPCP04921 128 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 FDX1P10109 184 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 HSD17B4P51659 736 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 FAM26FQ5R3K3 315 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 SAMD3Q8N6K7 520 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 MB21D1Q8N884 522 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 CNOT6LQ96LI5 555 aaKnown RBP25.9■■□□□ 1.74
MSX2-201ENST00000239243 TSG101Q99816 390 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 TUBGCP2Q9BSJ2 902 aa25.9■■□□□ 1.74
MSX2-201ENST00000239243 ZNF536O15090 1300 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 POTEFA5A3E0 1075 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 POTEIP0CG38 1075 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 CYP11B2P19099 503 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 SLC12A3P55017 1021 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 CEP55Q53EZ4 464 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 POTEGQ6S5H5 508 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 POTEEQ6S8J3 1075 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 SCYL3Q8IZE3 742 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 MYOCDQ8IZQ8 938 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 KIF18AQ8NI77 898 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 CYP2W1Q8TAV3 490 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 WDR18Q9BV38 432 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 TANGO6Q9C0B7 1094 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 MAP3K20Q9NYL2 800 aaKnown RBP25.89■■□□□ 1.74
MSX2-201ENST00000239243 ZNF112Q9UJU3 913 aa25.89■■□□□ 1.74
MSX2-201ENST00000239243 CASP14P31944 242 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 GHRHRQ02643 423 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 KRT18P05783 430 aaKnown RBP25.88■■□□□ 1.73
MSX2-201ENST00000239243 SPATA31C1P0DKV0 1188 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 PRKCSHP14314 528 aaPredicted RBP25.88■■□□□ 1.73
MSX2-201ENST00000239243 CPLX3Q8WVH0 158 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 SLC5A5Q92911 643 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 AGBL1Q96MI9 1066 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 SLC38A10Q9HBR0 1119 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 PPP2R3BQ9Y5P8 575 aa25.88■■□□□ 1.73
MSX2-201ENST00000239243 MTMR2Q13614 643 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 ANGEL2Q5VTE6 544 aaKnown RBP25.87■■□□□ 1.73
MSX2-201ENST00000239243 LRCH2Q5VUJ6 765 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 KRT26Q7Z3Y9 468 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 GPC2Q8N158 579 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 SYT2Q8N9I0 419 aaPredicted RBP25.87■■□□□ 1.73
MSX2-201ENST00000239243 ZNF507Q8TCN5 953 aa25.87■■□□□ 1.73
MSX2-201ENST00000239243 ZNF592Q92610 1267 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms