RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CCND3P30281 292 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-201ENST00000238688 MCM7P33993 719 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 CCNA1P78396 465 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 ZNF174Q15697 407 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 CAMK4Q16566 473 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 INF2Q27J81 1249 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 LHX8Q68G74 356 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 RASGRP2Q7LDG7 609 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 C4orf32Q8N8J7 132 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 IQUBQ8NA54 791 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 PRPF38AQ8NAV1 312 aaKnown RBP14.91□□□□□ -0.02
SLIRP-201ENST00000238688 CNNM3Q8NE01 707 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 DPF3Q92784 378 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 ATG4CQ96DT6 458 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 TANGO6Q9C0B7 1094 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 CCSER1Q9C0I3 900 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 SPATC1LQ9H0A9 340 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 PRR12Q9ULL5 1215 aa14.91□□□□□ -0.02
SLIRP-201ENST00000238688 MRPL11Q9Y3B7 192 aaKnown RBP14.91□□□□□ -0.02
SLIRP-201ENST00000238688 RANBP2P49792 3224 aaKnown RBP14.9□□□□□ -0.02
SLIRP-201ENST00000238688 CYP3A7-CYP3A51PA0A087WV96 503 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 FAM205CA6NFA0 338 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 TBX3O15119 743 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 PPP1R11O60927 126 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-201ENST00000238688 SMC2O95347 1197 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 CYP3A7P24462 503 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 SLC16A2P36021 539 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 GHRHRQ02643 423 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 PDIA5Q14554 519 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 TMEM266Q2M3C6 531 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 NT5DC1Q5TFE4 455 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 TRMT44Q8IYL2 757 aaKnown RBP14.9□□□□□ -0.02
SLIRP-201ENST00000238688 KCTD17Q8N5Z5 321 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 ANKLE1Q8NAG6 615 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 TBCKQ8TEA7 893 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 PPP1R9BQ96SB3 815 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 HTATIP2Q9BUP3 242 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 PRO3102Q9H379 93 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 CPVLQ9H3G5 476 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 FBXO28Q9NVF7 368 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 DACH1Q9UI36 760 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 MRVI1Q9Y6F6 885 aa14.9□□□□□ -0.02
SLIRP-201ENST00000238688 RAD21O60216 631 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 FLOT1O75955 427 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 ERCC3P19447 782 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 ATP2B1P20020 1258 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
SLIRP-201ENST00000238688 OAZ1P54368 228 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 HS1BP3Q53T59 392 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 CKAP2LQ8IYA6 745 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 TRPV1Q8NER1 839 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 REPS2Q8NFH8 660 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 MBOAT7Q96N66 472 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 CLIC6Q96NY7 704 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 CCDC39Q9UFE4 941 aa14.89□□□□□ -0.03
SLIRP-201ENST00000238688 VWA3AA6NCI4 1184 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 SPDYE3A6NKU9 549 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 CCNT1O60563 726 aaKnown RBP14.88□□□□□ -0.03
SLIRP-201ENST00000238688 COBLO75128 1261 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 ZNF165P49910 485 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 TMEM132BQ14DG7 1078 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 FAM83BQ5T0W9 1011 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 WDR78Q5VTH9 848 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 SLFN12Q8IYM2 578 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 SPATA20Q8TB22 786 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 SYMPKQ92797 1274 aaKnown RBP14.88□□□□□ -0.03
SLIRP-201ENST00000238688 PDLIM2Q96JY6 352 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 SLF1Q9BQI6 1058 aa14.88□□□□□ -0.03
SLIRP-201ENST00000238688 POLR2DO15514 142 aaKnown RBP14.87□□□□□ -0.03
SLIRP-201ENST00000238688 ACTN4O43707 911 aaKnown RBP14.87□□□□□ -0.03
SLIRP-201ENST00000238688 ICAM1P05362 532 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 CYP3A4P08684 503 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 ADORA2AP29274 412 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 CIITAP33076 1130 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 SREBF1P36956 1147 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 UBA7P41226 1012 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 FXR1P51114 621 aaKnown RBP eCLIP14.87□□□□□ -0.03
SLIRP-201ENST00000238688 NLRP12P59046 1061 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 POSTNQ15063 836 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 LETM2Q2VYF4 491 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 JAKMIP3Q5VZ66 844 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 NECAB2Q7Z6G3 386 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 MCF2L2Q86YR7 1114 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 RASGRP4Q8TDF6 673 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 GSDMAQ96QA5 445 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 MTMR9Q96QG7 549 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 NUP88Q99567 741 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-201ENST00000238688 LOXHD1Q8IVV2 1947 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 MCM3APO60318 1980 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 PFASO15067 1338 aa14.87□□□□□ -0.03
SLIRP-201ENST00000238688 MEIS2O14770 477 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 STRNO43815 780 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 COL6A1P12109 1028 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 CYP2C19P33261 490 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 TPM4P67936 248 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 MDM2Q00987 491 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-201ENST00000238688 CALCRLQ16602 461 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms