RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 NAA25Q14CX7 972 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC38Q502W7 563 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RC3H1Q5TC82 1133 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RRAGBQ5VZM2 374 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 CATIPQ7Z7H3 387 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 FAM89AQ96GI7 184 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RHOXF2Q9BQY4 288 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 BTG4Q9NY30 223 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 TSKSQ9UJT2 592 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ROBO3Q96MS0 1386 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 BICDL2A1A5D9 508 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 M0R2N6 131 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 AGPSO00116 658 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 KLRC4O43908 158 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 GJA8P48165 433 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CCT5P48643 541 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TRPC1P48995 793 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 PTPN21Q16825 1174 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 PFKFB3Q16875 520 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TTI2Q6NXR4 508 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 MICALCLQ6ZW33 695 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CD302Q8IX05 232 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 ENAHQ8N8S7 591 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TRIM58Q8NG06 486 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TEKT1Q969V4 418 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC102AQ96A19 550 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC47Q96A33 483 aaKnown RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 JAKMIP2Q96AA8 810 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 KBTBD4Q9NVX7 518 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 ZNF510Q9Y2H8 683 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SLC4A4Q9Y6R1 1079 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 GRIN2DO15399 1336 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TTC26A0AVF1 554 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SMAPO00193 183 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 E2F6O75461 281 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 IL6STP40189 918 aaPredicted RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC40Q4G0X9 1142 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 EARS2Q5JPH6 523 aaKnown RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 THEMIS2Q5TEJ8 643 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 KLHL10Q6JEL2 608 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 BZW1Q7L1Q6 419 aaKnown RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 PROM2Q8N271 834 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 FAM76AQ8TAV0 307 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SLC35B4Q969S0 331 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 AK8Q96MA6 479 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 MMS19Q96T76 1030 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SLF1Q9BQI6 1058 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SELENOOQ9BVL4 669 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 DISC1Q9NRI5 854 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TAB2Q9NYJ8 693 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 TMOD4Q9NZQ9 345 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 GMEB1Q9Y692 573 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 ATP1A1P05023 1023 aaKnown RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 IRAK1P51617 712 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 PTGDRQ13258 359 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SLC10A5Q5PT55 438 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 NCAPH2Q6IBW4 605 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 LMOD2Q6P5Q4 547 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 RIOK1Q9BRS2 568 aaKnown RBP6.94□□□□□ -1.3
SGIP1-201ENST00000237247 UNC45AQ9H3U1 944 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 EXOC1Q9NV70 894 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 SNX12Q9UMY4 172 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 WDR37Q9Y2I8 494 aa6.94□□□□□ -1.3
SGIP1-201ENST00000237247 CES2O00748 559 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 EIF3HO15372 352 aaKnown RBP eCLIP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SKAP2O75563 359 aaPredicted RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 NTSR2O95665 410 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 TCP1P17987 556 aaKnown RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 VCAM1P19320 739 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 AFMP43652 599 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 CDR1P51861 262 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 EPHB4P54760 987 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 STX17P56962 302 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 UBXN1Q04323 297 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 TSR1Q2NL82 804 aaKnown RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 MFSD4BQ5TF39 518 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 CRELD2Q6UXH1 353 aaPredicted RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 PARP9Q8IXQ6 854 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SMYD1Q8NB12 490 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SMARCC1Q92922 1105 aaPredicted RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SUGCTQ9HAC7 445 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 TMOD3Q9NYL9 352 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SPATA7Q9P0W8 599 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 ASAP1Q9ULH1 1129 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SHTN1A0MZ66 631 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 IPO5O00410 1097 aaKnown RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 ABLIM1O14639 778 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 PSMA7O14818 248 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SCG2P13521 617 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 CCT6AP40227 531 aaKnown RBP6.93□□□□□ -1.3
SGIP1-201ENST00000237247 PRCPP42785 496 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 RANBP1P43487 201 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 IL17AQ16552 155 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 SBK1Q52WX2 424 aa6.93□□□□□ -1.3
SGIP1-201ENST00000237247 HSP90AA4PQ58FG1 418 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms