RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 RAB21Q9UL25 225 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PACSIN2Q9UNF0 486 aaPredicted RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 SIK3Q9Y2K2 1263 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PCDHA13Q9Y5I0 950 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 MYH10P35580 1976 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PSMD14O00487 310 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 KRT18P05783 430 aaKnown RBP10.15□□□□□ -0.79
SYDE2-201ENST00000234668 SLC1A4P43007 532 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 KCNMA1Q12791 1236 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 COASYQ13057 564 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 QRICH1Q2TAL8 776 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 PRR16Q569H4 304 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 SLF2Q8IX21 1173 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 TBC1D22AQ8WUA7 517 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.79
SYDE2-201ENST00000234668 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.79
SYDE2-201ENST00000234668 CUEDC2Q9H467 287 aa10.15□□□□□ -0.79
SYDE2-201ENST00000234668 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 MYL1P05976 194 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 MAGEA1P43355 309 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 POLR2FP61218 127 aaKnown RBP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 UBXN2AP68543 259 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 PABPC4Q13310 644 aaKnown RBP eCLIP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 TRMT1LQ7Z2T5 733 aaKnown RBP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 FAM114A1Q8IWE2 563 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 PROM2Q8N271 834 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 CUL5Q93034 780 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 DNAJC19Q96DA6 116 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 GOLPH3Q9H4A6 298 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 BTAF1O14981 1849 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 EIF3CLB5ME19 914 aaKnown RBP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 ANKRD65E5RJM6 399 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 ERLIN1O75477 346 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 ACTN1P12814 892 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 FXR2P51116 673 aaKnown RBP eCLIP10.14□□□□□ -0.792e-16■■■■□ 21.8
SYDE2-201ENST00000234668 CASP5P51878 434 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 USP14P54578 494 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 FOXR1Q6PIV2 292 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 LRRC55Q6ZSA7 311 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 GPBP1Q86WP2 473 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 MYOCDQ8IZQ8 938 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 NOC3LQ8WTT2 800 aaKnown RBP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 ERGIC2Q96RQ1 377 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 EIF3CQ99613 913 aaKnown RBP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 NUP58Q9BVL2 599 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 SCAF8Q9UPN6 1271 aaKnown RBP10.14□□□□□ -0.79
SYDE2-201ENST00000234668 AFF2P51816 1311 aa10.14□□□□□ -0.79
SYDE2-201ENST00000234668 MED24O75448 989 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 VAV2P52735 878 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 MRPL12P52815 198 aaKnown RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 JAG1P78504 1218 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 FAM26FQ5R3K3 315 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 C15orf52Q6ZUT6 534 aaKnown RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 LRRC1Q9BTT6 524 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 LSM14BQ9BX40 385 aaKnown RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 MYO1AQ9UBC5 1043 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 DMGDHQ9UI17 866 aaKnown RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 PLAGL2Q9UPG8 496 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 PCNTO95613 3336 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 ZBTB39O15060 712 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 ZBTB5O15062 677 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 ATP8B1O43520 1251 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 PLA2G4BP0C869 781 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 MAPK8IP2Q13387 824 aaPredicted RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 MAN2A1Q16706 1144 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 MTMR8Q96EF0 704 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 RAB34Q9BZG1 259 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 DDX60LQ5H9U9 1706 aaKnown RBP10.13□□□□□ -0.79
SYDE2-201ENST00000234668 LAMB1P07942 1786 aa10.13□□□□□ -0.79
SYDE2-201ENST00000234668 RSPH10B2B2RC85 870 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 FTCDO95954 541 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 RSPH10BP0C881 870 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 SNHG28P0DPA3 235 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 PAPD7Q5XG87 772 aaKnown RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 SLFN13Q68D06 897 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 GUF1Q8N442 669 aaKnown RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 TBC1D5Q92609 795 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 PACSIN1Q9BY11 444 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 TLR2O60603 784 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 PRPF6O94906 941 aaKnown RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 POLD1P28340 1107 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CRKP46108 304 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 KCNA1Q09470 495 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 RAPGEF1Q13905 1077 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CDC37Q16543 378 aaPredicted RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CERKLQ49MI3 558 aaPredicted RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 SH3BP5LQ7L8J4 393 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 BAP1Q92560 729 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 TEKT1Q969V4 418 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 RGL1Q9NZL6 768 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 BCS1LQ9Y276 419 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms