RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NBNO60934 754 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 A1BGP04217 495 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 COL6A1P12109 1028 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 IL15P40933 162 aaPredicted RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 LIG3P49916 1009 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 INHBCP55103 352 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 PRKG1Q13976 671 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 CCNG2Q16589 344 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 SKIDA1Q1XH10 827 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 IGSF11Q5DX21 431 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 CEP135Q66GS9 1140 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 LRP10Q7Z4F1 713 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 KAT2BQ92831 832 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 LLPHQ9BRT6 129 aaKnown RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 C19orf44Q9H6X5 657 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 IQCA1LA6NCM1 817 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 ATP9BO43861 1147 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 RNF8O76064 485 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 CPP00450 1065 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 HSPD1P10809 573 aaKnown RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 NCAM1P13591 858 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 ITGA7Q13683 1181 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 OTUD7BQ6GQQ9 843 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 TMEM53Q6P2H8 277 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 CATSPER4Q7RTX7 472 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 RBM14Q96PK6 669 aaKnown RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 SDF4Q9BRK5 362 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 GOLPH3LQ9H4A5 285 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 POLMQ9NP87 494 aaPredicted RBP9.17□□□□□ -0.94
SPARC-201ENST00000231061 CEP131Q9UPN4 1083 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 SLC30A1Q9Y6M5 507 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 RFX7Q2KHR2 1363 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 C1orf167Q5SNV9 1468 aa9.17□□□□□ -0.94
SPARC-201ENST00000231061 MAST3O60307 1309 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 RNF113AO15541 343 aaKnown RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 NMT2O60551 498 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 BAIAP3O94812 1187 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 PDGFRBP09619 1106 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 ALAS2P22557 587 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 STT3AP46977 705 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 FOXO4P98177 505 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 ZMYM1Q5SVZ6 1142 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 ZNF804AQ7Z570 1209 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 DSCC1Q9BVC3 393 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 PAPOLBQ9NRJ5 636 aaKnown RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 EYA2O00167 538 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 CTDNEP1O95476 244 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 EPB42P16452 691 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 STK38Q15208 465 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 NBPF14Q5TI25 921 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 GKAP1Q5VSY0 366 aaPredicted RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 SH3BP5LQ7L8J4 393 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 ATG9AQ7Z3C6 839 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 PLA2G4DQ86XP0 818 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 LMBR1Q8WVP7 490 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 GPHNQ9NQX3 736 aaPredicted RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 C5P01031 1676 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 A0A1W2PQ67 120 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 KIF2AO00139 706 aaPredicted RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 CES1P23141 567 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 GUCY2FP51841 1108 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 CASP7P55210 303 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 PABPC4Q13310 644 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPARC-201ENST00000231061 CWF19L1Q69YN2 538 aaKnown RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 RBM43Q6ZSC3 357 aaKnown RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
SPARC-201ENST00000231061 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 CEP72Q9P209 647 aa9.16□□□□□ -0.94
SPARC-201ENST00000231061 MRC1P22897 1456 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 TMEM221A6NGB7 291 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 CPLX1O14810 134 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 RHOBTB3O94955 611 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 POLR3DP05423 398 aaPredicted RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 PEX5P50542 639 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 MRPS35P82673 323 aaKnown RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 CD83Q01151 205 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 STK11Q15831 433 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 POMZP3Q6PJE2 187 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 SLC44A2Q8IWA5 706 aaPredicted RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 CCDC144CPQ8IYA2 1237 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 KCT2Q8NC54 265 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 CACTINQ8WUQ7 758 aaKnown RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 FAM126AQ9BYI3 521 aaPredicted RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 EDARQ9UNE0 448 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 A0A087WUV0 522 aaPredicted RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 H0YC42 278 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 PDIA3P30101 505 aaKnown RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 GBP2P32456 591 aaPredicted RBP9.15□□□□□ -0.94
SPARC-201ENST00000231061 HOXD12P35452 270 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 STAT3P40763 770 aa9.15□□□□□ -0.94
SPARC-201ENST00000231061 MRPL12P52815 198 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms