RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 LIMA1Q9UHB6 759 aaKnown RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 PAK2Q13177 524 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 TSGA10Q9BZW7 698 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 GOLGA6L10A0A0M3HER8 536 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 F8W031 263 aaPredicted RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 SKAP2O75563 359 aaPredicted RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 RASSF9O75901 435 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 FAM107AO95990 144 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 XBP1P17861 261 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 PRDX5P30044 214 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 HERVK_113P62684 666 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 NR5A1Q13285 461 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 RNF217Q8TC41 542 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 IRAK4Q9NWZ3 460 aa11.32□□□□□ -0.6
CHERP-201ENST00000198939 CNOT7Q9UIV1 285 aaKnown RBP11.32□□□□□ -0.6
CHERP-201ENST00000198939 GPAA1O43292 621 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 CRKP46108 304 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 MTMR14Q8NCE2 650 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 FAXDC2Q96IV6 333 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 HACL1Q9UJ83 578 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 MMP1P03956 469 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 FECHP22830 423 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 CACNA2D3Q8IZS8 1091 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 SPDL1Q96EA4 605 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 LACRTQ9GZZ8 138 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 INCENPQ9NQS7 918 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 UBE2Q2LH0YL09 131 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 TCP1P17987 556 aaKnown RBP11.31□□□□□ -0.6
CHERP-201ENST00000198939 PPP4CP60510 307 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 PPP1R7Q15435 360 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
CHERP-201ENST00000198939 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 GMLQ99445 158 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 NHEJ1Q9H9Q4 299 aaPredicted RBP11.31□□□□□ -0.6
CHERP-201ENST00000198939 KCNQ5Q9NR82 932 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 SNX12Q9UMY4 172 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 HYOU1Q9Y4L1 999 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
CHERP-201ENST00000198939 ERICH2A1L162 156 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 TNNI2P48788 182 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 ZNF280AP59817 542 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 GUCY2DQ02846 1103 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 TMEM87BQ96K49 555 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 TRIM47Q96LD4 638 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 TPX2Q9ULW0 747 aaKnown RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 CHD4Q14839 1912 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 SH2B2O14492 632 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 TOB1P50616 345 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 TNFAIP1Q13829 316 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 CERS5Q8N5B7 392 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 RUBCNQ92622 972 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 EPB41L5Q9HCM4 733 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 VPS54Q9P1Q0 977 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 RWDD2AQ9UIY3 292 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 AKR1B10O60218 316 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 FOXP1Q9H334 677 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 RMND1Q9NWS8 449 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 PARP1P09874 1014 aaKnown RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 PUS7LQ9H0K6 701 aaKnown RBP11.3□□□□□ -0.6
CHERP-201ENST00000198939 ATP6V0A4Q9HBG4 840 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
CHERP-201ENST00000198939 GAKO14976 1311 aa11.29□□□□□ -0.6
CHERP-201ENST00000198939 HGSO14964 777 aaPredicted RBP11.29□□□□□ -0.6
CHERP-201ENST00000198939 PRELPP51888 382 aa11.29□□□□□ -0.6
CHERP-201ENST00000198939 RTN1Q16799 776 aa11.29□□□□□ -0.6
CHERP-201ENST00000198939 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
CHERP-201ENST00000198939 CYB5R4Q7L1T6 521 aa11.29□□□□□ -0.6
CHERP-201ENST00000198939 IFIH1Q9BYX4 1025 aaKnown RBP11.29□□□□□ -0.6
CHERP-201ENST00000198939 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
CHERP-201ENST00000198939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHERP-201ENST00000198939 ESYT3A0FGR9 886 aa11.29□□□□□ -0.6
CHERP-201ENST00000198939 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
CHERP-201ENST00000198939 HEXIM1O94992 359 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms