RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 LARP4BQ92615 738 aaKnown RBP12.29□□□□□ -0.44
ACTN1-201ENST00000193403 PACSIN1Q9BY11 444 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 CRYBG1Q9Y4K1 1723 aa12.29□□□□□ -0.44
ACTN1-201ENST00000193403 TRIM37O94972 964 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 PEX19P40855 299 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MAGOHP61326 146 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MECOMQ03112 1051 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 CASKIN2Q8WXE0 1202 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MAGOHBQ96A72 148 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 EPN3Q9H201 632 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 CTNND1O60716 968 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 RHOBTB3O94955 611 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MDH1P40925 334 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 DIXDC1Q155Q3 683 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 GKAP1Q5VSY0 366 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 RUFY4Q6ZNE9 571 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 U2AF1L4Q8WU68 220 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 COA7Q96BR5 231 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 ADCY1Q08828 1119 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 NEDD9Q14511 834 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 MYCBPAPQ8TBZ2 947 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 GEMIN8Q9NWZ8 242 aaKnown RBP12.28□□□□□ -0.44
ACTN1-201ENST00000193403 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
ACTN1-201ENST00000193403 CHUKO15111 745 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 PTGISQ16647 500 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 NAALADL2Q58DX5 795 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 FAM83BQ5T0W9 1011 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 VGLL2Q8N8G2 317 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 PLA2G12BQ9BX93 195 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 VEZTQ9HBM0 779 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 AMACRQ9UHK6 382 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 TSKSQ9UJT2 592 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 AFF2P51816 1311 aa12.27□□□□□ -0.44
ACTN1-201ENST00000193403 A6NNZ2 444 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 DAPK3O43293 454 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PDHBP11177 359 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
ACTN1-201ENST00000193403 TUBB8Q3ZCM7 444 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 CCDC13Q8IYE1 715 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 MDM1Q8TC05 714 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 ZNF507Q8TCN5 953 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PIGSQ96S52 555 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PAIP2Q9BPZ3 127 aaKnown RBP12.27□□□□□ -0.45
ACTN1-201ENST00000193403 TLR10Q9BXR5 811 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 FBXL5Q9UKA1 691 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PCDHA6Q9UN73 950 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PCDHA8Q9Y5H6 950 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 SSR1P43307 286 aaKnown RBP12.27□□□□□ -0.45
ACTN1-201ENST00000193403 FAM26FQ5R3K3 315 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 ANKS4BQ8N8V4 417 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 GLIS3Q8NEA6 775 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 PLAGL2Q9UPG8 496 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 NFAT5O94916 1531 aa12.27□□□□□ -0.45
ACTN1-201ENST00000193403 TBC1D1Q86TI0 1168 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-201ENST00000193403 LRRC47Q8N1G4 583 aaKnown RBP12.26□□□□□ -0.45
ACTN1-201ENST00000193403 DDX12PQ92771 950 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 CYFIP2Q96F07 1278 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 SAMD15Q9P1V8 674 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 SALL4Q9UJQ4 1053 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 UTP11Q9Y3A2 253 aaKnown RBP12.26□□□□□ -0.45
ACTN1-201ENST00000193403 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 MRC1P22897 1456 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 ZNF233A6NK53 670 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 COPB2P35606 906 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 KCNB1Q14721 858 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 MAEAQ7L5Y9 396 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 SEMA6BQ9H3T3 888 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 MLXIPLQ9NP71 852 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 KCNK9Q9NPC2 374 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 SUFUQ9UMX1 484 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 HMGB1P1B2RPK0 211 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-201ENST00000193403 ACTN1P12814 892 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 RPAINQ86UA6 219 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 ANKRD42Q8N9B4 389 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 CELF4Q9BZC1 486 aaKnown RBP12.26□□□□□ -0.45
ACTN1-201ENST00000193403 PANK4Q9NVE7 773 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 KDM3BQ7LBC6 1761 aa12.26□□□□□ -0.45
ACTN1-201ENST00000193403 AFDNP55196 1824 aaKnown RBP12.26□□□□□ -0.45
ACTN1-201ENST00000193403 GMNCA6NCL1 334 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 MYMKA6NI61 221 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 GNPATO15228 680 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 TDP2O95551 362 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 KLRK1P26718 216 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 PLTPP55058 493 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 ADAM9Q13443 819 aa12.25□□□□□ -0.45
ACTN1-201ENST00000193403 IFI16Q16666 785 aaKnown RBP12.25□□□□□ -0.45
ACTN1-201ENST00000193403 UBE2SQ16763 222 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms