RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CCT7Q99832 543 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 PA2G4Q9UQ80 394 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 EXOC6BQ9Y2D4 811 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 H0YC42 278 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 H3BRJ5 948 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 AQRO60306 1485 aaKnown RBP eCLIP3.72□□□□□ -1.81
NEB-201ENST00000172853 COPB2P35606 906 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 STXBP2Q15833 593 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 KRT25Q7Z3Z0 450 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TRIM59Q8IWR1 403 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 DCLK2Q8N568 766 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 PPWD1Q96BP3 646 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 TYW1Q9NV66 732 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 LRRC53A6NM62 1247 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 INO80B-WBP1J3KQ70 363 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NSFP46459 744 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 SNX17Q15036 470 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CERKLQ49MI3 558 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 PLEKHM3Q6ZWE6 761 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CLYBLQ8N0X4 340 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 B4GALNT2Q8NHY0 566 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TRIM11Q96F44 468 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SAE1Q9UBE0 346 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 TK2O00142 265 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 P4HBP07237 508 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 ANXA11P50995 505 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 PDE1BQ01064 536 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CCDC92Q53HC0 331 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 KCNS3Q9BQ31 491 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SUN2Q9UH99 717 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 DDX25Q9UHL0 483 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 PCDHA1Q9Y5I3 950 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 EBAG9O00559 213 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 DNAJC6O75061 913 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 AP1B1Q10567 949 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 LAMC2Q13753 1193 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CAMK1DQ8IU85 385 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ATP8A2Q9NTI2 1148 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CUX1P39880 1505 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 GFAPP14136 432 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CCND2P30279 289 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 HNRNPH2P55795 449 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 ARL4CP56559 192 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 DAB2P98082 770 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TJAP1Q5JTD0 557 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 KRT39Q6A163 491 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ANKRD49Q8WVL7 239 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ORC4O43929 436 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 MCF2P10911 925 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 HSPA2P54652 639 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 KCNA1Q09470 495 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ARHGEF7Q14155 803 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 PPP2R5EQ16537 467 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 FERMT3Q86UX7 667 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CNPPD1Q9BV87 410 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 C5orf58C9J3I9 102 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 MCM4P33991 863 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TNFAIP2Q03169 654 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 BFSP1Q12934 665 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ZNF394Q53GI3 561 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TCP11X2Q5H9J9 407 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 BTG4Q9NY30 223 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ANAPC2Q9UJX6 822 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SPDYE5A6NIY4 337 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 E5RI56 91 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 BIRC5O15392 142 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TRAPPC3O43617 180 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 COBLO75128 1261 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SPDYE7PQ495Y7 208 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 RUSC2Q8N2Y8 1516 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 KRT4P19013 534 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ATP6V1C1P21283 382 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NCALDP61601 193 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 PPP2R5BQ15173 497 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CALCRLQ16602 461 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 C6orf118Q5T5N4 469 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 KRT40Q6A162 431 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 TPH2Q8IWU9 490 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CCDC105Q8IYK2 499 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 RTKN2Q8IZC4 609 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CAMKK1Q8N5S9 505 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ZNF248Q8NDW4 579 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 VPS39Q96JC1 886 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 OSBPL9Q96SU4 736 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 KRCC1Q9NPI7 259 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 DARSP14868 501 aaKnown RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 GSTA3Q16772 222 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 TRIM71Q2Q1W2 868 aaKnown RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 SCN4BQ8IWT1 228 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 C17orf53Q8N3J3 647 aaPredicted RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 TRMT1Q9NXH9 659 aaKnown RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 ARHGEF9O43307 516 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 ZNF189O75820 626 aaPredicted RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 EIF2S1P05198 315 aaKnown RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 ELOAQ14241 798 aaKnown RBP3.71□□□□□ -1.81
NEB-201ENST00000172853 CCNYQ8ND76 341 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 PEX1O43933 1283 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 PIK3CAP42336 1068 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 MFAP3P55082 362 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms