RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Tom1l2Q5SRX1 507 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Clca4aQ6Q473 924 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Rbm41Q8JZV4 413 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Acat1Q8QZT1 424 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Herc3A6H6S0 1050 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tph1P17532 447 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Krt19P19001 403 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Pik3caP42337 1068 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Hook3Q8BUK6 718 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ssc5dQ8BV57 1371 aa10.49□□□□□ -0.73
Trim9-201ENSMUST00000110520 Zfp597E9Q6S0 419 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 H2afzP0C0S6 128 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 H2afvQ3THW5 128 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ctnna2Q61301 953 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 DaglaQ6WQJ1 1044 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tubb2aQ7TMM9 445 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Actn1Q7TPR4 892 aaKnown RBP10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Nucks1Q80XU3 234 aaKnown RBP10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Iffo1Q8BXL9 562 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tubb2bQ9CWF2 445 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Mon2Q80TL7 1715 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Prss51A0A286YDY8 319 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Fyb2A2A995 729 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Zc3h7bF8VPP8 982 aaKnown RBP10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Kcnh2O35219 1162 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Q3TTJ4 293 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Fhdc1Q3ULZ2 1149 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Stxbp3Q60770 592 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Gpt2Q8BGT5 522 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 F13a1Q8BH61 732 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Fam228aQ8CDW1 299 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Med10Q9CXU0 135 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 NkapQ9D0F4 415 aaKnown RBP10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ddx25Q9QY15 484 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Stim2P83093 746 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ric8aQ3TIR3 530 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Pnma5Q5DTT8 618 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Gja3Q64448 417 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Fermt3Q8K1B8 665 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 MlxiplQ99MZ3 864 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cep19Q9CQA8 163 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cyp2s1Q9DBX6 501 aa10.48□□□□□ -0.73
Trim9-201ENSMUST00000110520 AW822073A0A0N4SUK1 652 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Vmn2r78K7N6U5 853 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tcp1P11983 556 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Zfp42P22227 288 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Esyt2Q3TZZ7 845 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Zbtb17Q60821 794 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ift20Q61025 132 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ddx3yQ62095 658 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Hdac10Q6P3E7 666 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 GopcQ8BH60 463 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cog5Q8C0L8 829 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Vps52Q8C754 723 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Efcab8Q8C9R9 203 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 WaslQ91YD9 501 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ndufab1Q9CR21 156 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Sdr42e1Q9D665 394 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Q9DAQ4 598 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Lcmt1A0A0U1RNF2 332 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Vmn2r79E9Q067 851 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Rad51bO35719 350 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Pgrmc1O55022 195 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Adcy7P51829 1099 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tubb5P99024 444 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tsga10Q6NY15 697 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ddx39aQ8VDW0 427 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 PpanQ91YU8 470 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Eif2ak1Q9Z2R9 619 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Als2Q920R0 1651 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Arhgap6O54834 987 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Rnf40Q3U319 1001 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 AcrbpQ3V140 540 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Specc1Q5SXY1 1067 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Zfp341Q6PGC9 846 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Zmynd15Q8C0R7 736 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Spc24Q9D083 201 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 BcamQ9R069 622 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Vmn2r71L7N2D8 855 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Nmt1O70310 496 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Axin2O88566 840 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tubb4bP68372 445 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Nhej1Q3KNJ2 295 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cyp2c67Q569X9 491 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cct6bQ61390 531 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Fbxo28Q8BIG4 368 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ttc8Q8VD72 515 aa10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Gtpbp4Q99ME9 634 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cd2bp2Q9CWK3 342 aaKnown RBP10.47□□□□□ -0.73
Trim9-201ENSMUST00000110520 FosP01101 380 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Slc12a2P55012 1205 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 PtgdrP70263 357 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Cyp2e1Q05421 493 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Kctd16Q5DTY9 427 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Swap70Q6A028 585 aaKnown RBP10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Tlr13Q6R5N8 991 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Trmt2aQ8BNV1 574 aaKnown RBP10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Mrgprx1Q8CIP3 322 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Ppp1r11Q8K1L5 131 aa10.46□□□□□ -0.73
Trim9-201ENSMUST00000110520 Spire2Q8K1S6 718 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms