RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Lrrk2Q5S006 2527 aa9.56□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Srsf11E9Q6E5 511 aaKnown RBP9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Bnip3O55003 187 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Mybl2P48972 704 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Neurod6P48986 337 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Rgs9bpQ148R9 237 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Ogfod1Q3U0K8 545 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Prss36Q5K2P8 849 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Neurod2Q62414 383 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Proser3Q7TSA6 634 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Daam2Q80U19 1115 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Mak16Q8BGS0 296 aaKnown RBP9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Znf689Q8BKK5 500 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Plekhs1Q8BW88 474 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Robo4Q8C310 1012 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Ftsj1Q8CBC7 324 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Sept8Q8CHH9 429 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Fez1Q8K0X8 392 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Vsx1Q91V10 363 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Pkp2Q9CQ73 795 aaKnown RBP9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 4921524L21RikQ9D5T2 438 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Mtmr9Q9Z2D0 545 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Dchs1E9PVD3 3291 aa9.55□□□□□ -0.88
Scn8a-202ENSMUST00000096198 LctF8VPT3 1931 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Ep300B2RWS6 2412 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Gm36210A0A1B0GS00 229 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 AU015836B2RUM3 263 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Tgfbr3lD3YZZ2 297 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Vmn1r86L7N213 316 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Rgs2O08849 211 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 TsksO54887 585 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Cbfa2t3O54972 620 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Tnfaip1O70479 316 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Gmeb2P58929 530 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Pou2f2Q00196 463 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Bpifa6Q0VGU8 367 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Cdca2Q14B71 982 aaKnown RBP9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Esyt2Q3TZZ7 845 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Prpf38aQ4FK66 312 aaKnown RBP9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Trappc3lQ4KL14 181 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Q5XFZ0 217 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 EfsQ64355 560 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Pan2Q8BGF7 1200 aaKnown RBP9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Usp20Q8C6M1 916 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 CrbnQ8C7D2 445 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Fgd4Q91ZT5 766 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Cstf1Q99LC2 431 aaKnown RBP9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Arhgap8Q9CXP4 425 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 MthfsQ9D110 203 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Armc9Q9D2I5 817 aa9.54□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Klhdc7bA0A286YD60 1263 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Kdf1A2A9F4 397 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Apba1B2RUJ5 842 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 RaxO35602 342 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Tph1P17532 447 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Cst8P32766 142 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Krba1Q6NXZ1 1043 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Kcnt1Q6ZPR4 1224 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Ggt7Q99JP7 662 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Slc5a4aQ9ET37 656 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 IcoslgQ9JHJ8 322 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Ggps1Q9WTN0 300 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Cntnap2Q9CPW0 1332 aa9.53□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Scn3aA2ASI5 1947 aa9.52□□□□□ -0.88
Scn8a-202ENSMUST00000096198 Zscan4-ps2A0A1C7CYU6 506 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Diaph1O08808 1255 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Ercc3P49135 783 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Snap25P60879 206 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Plpp4Q0VBU9 271 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Mphosph8Q3TYA6 858 aaKnown RBP9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Uspl1Q3ULM6 1089 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Oog4Q4G0C7 502 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Dmc1Q61880 340 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Kcnk12Q76M80 430 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Vwa1Q8R2Z5 415 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 JmyQ9QXM1 983 aa9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 DspE9Q557 2883 aaKnown RBP9.52□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Gbf1Q6DFZ1 1861 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Adcy1O88444 1118 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Tatdn3Q3U1C6 294 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Ncbp1Q3UYV9 790 aaKnown RBP9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Rc3h1Q4VGL6 1130 aaKnown RBP9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 CslQ80X68 466 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Mical2Q8BML1 960 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Limd1Q9QXD8 668 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 CenpeQ6RT24 2474 aaKnown RBP9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Eif3aP23116 1344 aaKnown RBP9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Kdm3aQ6PCM1 1323 aa9.51□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Ptprz1B9EKR1 2312 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Tmem8bB1AWJ5 472 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Arhgef26D3YYY8 869 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Nolc1E9Q5C9 702 aaKnown RBP9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Stra6O70491 670 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Kcnk4O88454 398 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Tnfrsf17O88472 185 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Hoxb8P09632 243 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Syt2P46097 422 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 HelbQ6NVF4 1074 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Fbxo10Q7TQF2 950 aa9.5□□□□□ -0.89
Scn8a-202ENSMUST00000096198 Moxd2Q7TT41 619 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms