RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Nck2O55033 380 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 6820408C15RikQ8BJX2 354 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 1700016D06RikQ9DAA5 166 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Cog7Q3UM29 770 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Nuak1Q641K5 658 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Trim7Q923T7 510 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Magi2Q9WVQ1 1275 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Tcof1O08784 1320 aaKnown RBP18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Serpina3iD3Z450 408 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 S100a5P63084 93 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Atp5c1Q91VR2 298 aaKnown RBP18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Gja10Q9WUS4 505 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Kif9Q9WV04 790 aa18.77■□□□□ 0.6
Usp48-201ENSMUST00000055131 Prss51A0A286YDY8 319 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Hdac4Q6NZM9 1076 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ppp1r16bQ8VHQ3 568 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ndst4Q9EQW8 872 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 ZfaP23607 742 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Pim2Q62070 370 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Hoxa13Q62424 386 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 PigsQ6PD26 555 aaKnown RBP18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Dars2Q8BIP0 653 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cox16Q9CR63 106 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 RabggtaQ9JHK4 567 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Vstm4T1NXB5 319 aa18.77■□□□□ 0.59
Usp48-201ENSMUST00000055131 Nova2D3YVV7 556 aaKnown RBP18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Casp14O89094 257 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Tph1P17532 447 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Prpf6Q91YR7 941 aaKnown RBP18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cttnbp2nlQ99LJ0 638 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 AdarQ99MU3 1178 aaKnown RBP18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ccdc70Q9D9B0 223 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Kdm5aQ3UXZ9 1690 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Tnip3A0A1D5RMN0 279 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Eef2kO08796 724 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Znf652Q5DU09 608 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cfap52Q5F201 620 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ppfia2Q8BSS9 1257 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mrps22Q9CXW2 359 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Pacsin2Q9WVE8 486 aaKnown RBP18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 HnrnpcQ9Z204 313 aaKnown RBP18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 GabrdP22933 449 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cep104Q80V31 926 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Tmem179Q8BHH9 233 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mtrf1lQ8BJU9 373 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Grtp1Q9D3N8 359 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Gins2Q9D600 185 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Tspan17Q9D7W4 270 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Prr5lA2AVJ5 370 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ccdc153P0C7Q1 202 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Pfdn6Q03958 127 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Asap3Q5U464 904 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Panx2Q6IMP4 677 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Znf532Q6NXK2 1036 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cep85Q8BMK0 761 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mknk2Q8CDB0 459 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mei1Q9D4I2 1268 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Caln1Q9JJG7 219 aa18.76■□□□□ 0.59
Usp48-201ENSMUST00000055131 Gm6657A0A1B0GRJ3 277 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cyp2c23E9Q5K4 494 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Fam228bQ497Q6 232 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Tcp11l2Q8K1H7 517 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Defb15Q8R2I5 79 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Slc13a1Q9JHI4 594 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ppp1r13bQ62415 1087 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Dync1li2Q6PDL0 492 aaKnown RBP18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Pramel6Q810Y9 485 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Zfp317Q8C0Q5 607 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ccdc15Q8C9M2 810 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mysm1Q69Z66 819 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 DffaO54786 331 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Nab2Q61127 525 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Skiv2lQ6NZR5 1244 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Uggt2E9Q4X2 1504 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Phf20l1Q8CCJ9 1013 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Coa7Q921H9 231 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ecel1Q9JMI0 775 aa18.75■□□□□ 0.59
Usp48-201ENSMUST00000055131 Lmo7E9PYF4 1699 aaKnown RBP18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Klhl34A2AI76 644 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Gm5592Q3V0A6 857 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Utp11Q9CZJ1 253 aaKnown RBP18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Ehd4Q9EQP2 541 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Clasp1Q80TV8 1535 aaKnown RBP18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Cyth3O08967 399 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Taf1bP97358 586 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Caprin1Q60865 707 aaKnown RBP18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Agap2Q3UHD9 1186 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Dclk2Q6PGN3 756 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Prkag2Q91WG5 566 aa18.74■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mdh1P14152 334 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Krt32Q62168 407 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Oxsr1Q6P9R2 527 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Prpsap2Q8R574 369 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Psmd2Q8VDM4 908 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Serpinb3bQ9D1Q5 387 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Mfap3lQ9D3X9 409 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Sorbs1Q62417 1290 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Prpf31Q8CCF0 499 aaKnown RBP18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 Rtel1Q0VGM9 1203 aa18.73■□□□□ 0.59
Usp48-201ENSMUST00000055131 B4galnt4Q766D5 1034 aa18.73■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms