RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Irf6P97431 467 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Trim25Q61510 634 aaKnown RBP11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Ssh1Q76I79 1042 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Bcar1Q61140 874 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cnnm4Q69ZF7 771 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Nlgn2Q69ZK9 836 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Zfp943Q6NZP4 507 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Fgd5Q80UZ0 1219 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 TrabdQ99JY4 376 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Mtif3Q9CZD5 276 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Tmx2Q9D710 295 aaKnown RBP11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 PrkcshO08795 521 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cep63Q3UPP8 700 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Rc3h1Q4VGL6 1130 aaKnown RBP11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Nr2c1Q505F1 590 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Anapc5Q8BTZ4 740 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Defb19Q8K3I8 83 aa11.61□□□□□ -0.55
Limch1-201ENSMUST00000038188 Fxr1Q61584 677 aaKnown RBP11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Ppp2r2dQ925E7 453 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cpsf3Q9QXK7 684 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Tjp3Q9QXY1 905 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Gm20425E9Q035 978 aaKnown RBP11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 SrprbP47758 269 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Kcnma1Q08460 1209 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Lrrc14bQ3UJB3 510 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Utp18Q5SSI6 552 aaKnown RBP11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Pank4Q80YV4 820 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Pde5aQ8CG03 865 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cnpy3Q9DAU1 276 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Smpd2O70572 419 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Btg1-ps1Q3V0S2 161 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Btg1-ps2Q3V0X0 161 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 DnerQ8JZM4 737 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Krt7Q9DCV7 457 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Tbc1d4Q8BYJ6 1307 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cd180Q62192 661 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Znf280dQ68FE8 974 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Phka2Q8BWJ3 1235 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 PdgfdQ925I7 370 aa11.6□□□□□ -0.55
Limch1-201ENSMUST00000038188 Krt74Q6IFZ9 495 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Usp20Q8C6M1 916 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Tmigd3G3X8R9 209 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Mmp10O55123 476 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Miga1Q4QQM5 600 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Tcp10aQ80W76 438 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cdca7lQ922M5 438 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Kif13aQ9EQW7 1749 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 E9QMW4 1145 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cyp2c37P56654 490 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Aak1Q3UHJ0 959 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Esyt3Q5DTI8 891 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cyp2c54Q6XVG2 490 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 SpopQ6ZWS8 374 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Ccar2Q8VDP4 922 aaKnown RBP11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cyp2c50Q91X77 490 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Cdc26Q99JP4 85 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Atp13a1Q9EPE9 1200 aaKnown RBP11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Myom1Q62234 1667 aaKnown RBP11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Rab34Q64008 259 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Rad9bQ6WBX7 403 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Sgsm2Q80U12 1005 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Dnaaf2Q8BPI1 814 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Slc8a2Q8K596 921 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Msantd4Q91YU3 345 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Ppp6r3Q922D4 844 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Castor1Q9CWQ8 331 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Capn15Q9JLG8 1095 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Rsph10bE9PYQ0 876 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Resp18P47939 175 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Esyt1Q3U7R1 1092 aaKnown RBP11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Fam228bQ497Q6 232 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Sdccag8Q80UF4 717 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Asic2Q925H0 512 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Atp12aQ9Z1W8 1035 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Ehbp1l1Q99MS7 1716 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Spata31d1bE9QA57 1361 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Adamts13Q769J6 1426 aa11.59□□□□□ -0.55
Limch1-201ENSMUST00000038188 Kcnj2P35561 428 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Acot10Q32MW3 439 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Gtf3c3Q3TMP1 882 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Pank2Q3U4S0 443 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Adamts18Q4VC17 1219 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Papd5Q68ED3 633 aaKnown RBP11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Fmnl3Q6ZPF4 1028 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Pramel7Q810Y8 479 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Ppp2r5dQ91V89 594 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Sept3Q9Z1S5 350 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Trpm1Q2TV84 1622 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Tex13cD3YU32 604 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Plekha5E9Q6H8 1269 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 P01734 135 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Rhbdl3P58873 404 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Zscan2Q07230 614 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Tmem199Q5SYH2 208 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 PoliQ6R3M4 717 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Spon2Q8BMS2 330 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Ppm1mQ8BU27 406 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Vps52Q8C754 723 aaKnown RBP11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Glis1Q8K1M4 789 aa11.58□□□□□ -0.56
Limch1-201ENSMUST00000038188 Prpf3Q922U1 683 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms