RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Nlrp1aQ2LKU9 1182 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Fndc3aQ8BX90 1198 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Serpinb3aG3X9V8 387 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm21962L7N280 338 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Trmt10cQ3UFY8 414 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Pdxdc1Q99K01 787 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 MlklQ9D2Y4 472 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Atg4a-psA0A0G2JFS9 396 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rnf10Q3UIW5 804 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Git1Q68FF6 770 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Wdr91Q7TMQ7 748 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Atg4aQ8C9S8 396 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Fkbp6Q91XW8 327 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rpn1Q91YQ5 608 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 PudpQ9D5U5 234 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Crlf3Q9Z2L7 442 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 InsrrQ9WTL4 1300 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Eif3cQ8R1B4 911 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ppil4Q9CXG3 492 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Mrpl40Q9Z2Q5 206 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gbp11A9YVJ5 442 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Drp2Q05AA6 957 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 CinpQ9D0V8 212 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 JrklB2RRL2 523 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Clcn6O35454 870 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Myo1aO88329 1043 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Traf5P70191 558 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rccd1Q8BTU7 377 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ipo11Q8K2V6 975 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Copb1Q9JIF7 953 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm9774A0A0A6YVU8 407 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Crnkl1P63154 690 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Zbtb45Q52KG4 520 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Znf652Q5DU09 608 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 VmacQ8BP01 174 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Tmed10Q9D1D4 219 aaKnown RBP15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 4931423N10RikQ9D4J9 382 aa15.01□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rad51bO35719 350 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Vti1aO89116 217 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Pms2P54279 859 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Tsc22d1P62500 1077 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 BcrQ6PAJ1 1270 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Klhl41A2AUC9 606 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Myo1eE9Q634 1107 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Sept2P42208 361 aaKnown RBP15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Itih1Q61702 907 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Jarid2Q62315 1234 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Znf507Q6ZPY5 941 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 CcnyQ8BGU5 341 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Fra10ac1Q8BP78 315 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Wdr47Q8CGF6 920 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Foxp3Q99JB6 429 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Adgrb2Q8CGM1 1561 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Hoxc9P09633 260 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Prpsap2Q8R574 369 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 HnmtQ91VF2 295 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Pi16Q9ET66 489 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Szrd1Q6NXN1 152 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Wdr27Q8C5V5 780 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ints9Q8K114 658 aaKnown RBP15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Hacd3Q8K2C9 362 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Traf7Q922B6 594 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Llgl2Q3TJ91 1027 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ccdc84Q4VA36 332 aaKnown RBP15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Mtmr10Q7TPM9 771 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Psma8Q9CWH6 250 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Slc12a7Q9WVL3 1083 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Znf711A2ANX9 761 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ahi1Q8K3E5 1047 aa15□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Samd9lQ69Z37 1561 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Dthd1E9PZX1 795 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Eya3P97480 510 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Dab2ipQ3UHC7 1189 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Zfp956Q3UZY6 572 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Cdc37Q61081 379 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Q922C1 641 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Dennd4bQ3U1Y4 1499 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Sstr3P30935 428 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Dhx37Q6NZL1 1150 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Champ1Q8K327 802 aaKnown RBP14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ankrd13cQ3UX43 541 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ccdc185Q3V118 621 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Prkab2Q6PAM0 271 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Q80ZQ3 298 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Plcb4Q91UZ1 1175 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rbm42Q91V81 474 aaKnown RBP14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 CpQ61147 1061 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Mei4Q8BRM6 389 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 ScgnQ91WD9 276 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Casq2O09161 415 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Eya1P97767 591 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Cadps2Q8BYR5 1297 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 RecqlQ9Z129 648 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Tbc1d30Q69ZT9 766 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gucy2gQ6TL19 1100 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Dhx38Q80X98 1228 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Armc6Q8BNU0 468 aa14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ino80bQ99PT3 375 aaKnown RBP14.99□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Kcnb2A6H8H5 907 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ftl2P49945 183 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms