RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	MRS3	P10566	314 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	NAT1	P12945	854 aa	Known RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	CDC42	P19073	191 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	DAL2	P25335	343 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	PAP1	P29468	568 aa	Known RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	DPH2	P32461	534 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	CBF2	P32504	956 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	SWI3	P32591	825 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	LTV1	P34078	463 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	PTH2	P34222	208 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	MIA40	P36046	403 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	IES5	P40060	125 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	YJL070C	P40361	888 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	IAH1	P41734	238 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	IME4	P41833	600 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	RPS10B	P46784	105 aa	Known RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	CPR7	P47103	393 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	TCB2	P48231	1178 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	KAP114	P53067	1004 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	STR3	P53101	465 aa	Known RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	NNF2	P53253	936 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	RPA49	Q01080	415 aa	Predicted RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	YDR415C	Q04033	374 aa	Predicted RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	RRB1	Q04225	511 aa	Known RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	YMR018W	Q04364	514 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	SCW10	Q04951	389 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	VID22	Q05934	901 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	ECM7	Q06200	448 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	ATG26	Q06321	1198 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	HIF1	Q12373	385 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	GIS3	Q12418	502 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	ERG27	Q12452	347 aa	Known RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	MAS2	P11914	482 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	CSG2	P35206	410 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	BLI1	P35727	113 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	BYE1	P36106	594 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	VID24	P38263	362 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	MNP1	P53163	194 aa	Predicted RBP	2.75	□□□□□ -1.97
HAA1	YPR008W	PPM1	Q04081	328 aa		2.75	□□□□□ -1.97
HAA1	YPR008W	RPB2	P08518	1224 aa	Known RBP	2.74	□□□□□ -1.97
HAA1	YPR008W	GAC1	P28006	793 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	SKG6	P32900	734 aa	Predicted RBP	2.74	□□□□□ -1.97
HAA1	YPR008W	CNS1	P33313	385 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	YKL050C	P35736	922 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	MRX3	P38172	270 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	MMS4	P38257	691 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	RCK2	P38623	610 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	HIS2	P38635	335 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	PKP1	P40530	394 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	PHO86	P46956	311 aa		2.74	□□□□□ -1.97
HAA1	YPR008W	YMR178W	Q03219	274 aa	Known RBP	2.74	□□□□□ -1.97
HAA1	YPR008W	YMR114C	Q04471	368 aa	Known RBP	2.74	□□□□□ -1.97
HAA1	YPR008W	RPS10A	Q08745	105 aa	Predicted RBP	2.74	□□□□□ -1.97
HAA1	YPR008W	COX4	P04037	155 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	PMS1	P14242	873 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	SNA3	P14359	133 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	PDA1	P16387	420 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	RPO26	P20435	155 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	RRT12	P25381	491 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	RPS2	P25443	254 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	MRP20	P32387	263 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	TRS65	P32893	560 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	AXL2	P38928	823 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	LCP5	P40079	357 aa	Predicted RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	RIP-Chip
HAA1	YPR008W	DPB11	P47027	764 aa	Predicted RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	RPC17	P47076	161 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	SGM1	P47166	707 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	DRN1	P53255	507 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	CWC22	P53333	577 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	IST1	P53843	298 aa	Predicted RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	INN1	P53901	409 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	GTR1	Q00582	310 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	VTI1	Q04338	217 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	NOP6	Q07623	225 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	ABP140	Q08641	628 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	AI5_BETA	Q9ZZX0	354 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YLR462W	O13556	202 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	CDC8	P00572	216 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	HXK2	P04807	486 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	RPS3	P05750	240 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	YML002W	P0CF17	737 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	ASP3-2	P0CX77	362 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	ASP3-3	P0CX78	362 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	ASP3-4	P0CX79	362 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	ASP3-1	P0CZ17	362 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	RPL4A	P10664	362 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	PRP16	P15938	1071 aa	Predicted RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	PRR1	P28708	518 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	ATS1	P31386	333 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	GCG1	P32656	232 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	MRS6	P32864	603 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	TEF4	P36008	412 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	SPC34	P36131	295 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YHL049C	P38722	271 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	AFG3	P39925	761 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YEL075C	P39972	122 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YER189W	P40104	122 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YTA12	P40341	825 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YFL064C	P43540	174 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms