RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 HVCN1Q96D96 273 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 CNOT6LQ96LI5 555 aaKnown RBP17.33■□□□□ 0.37
LINC02228-204ENST00000642115 IFIH1Q9BYX4 1025 aaKnown RBP17.33■□□□□ 0.37
LINC02228-204ENST00000642115 DISC1Q9NRI5 854 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 CCDC194A0A1B0GVG4 234 aa17.33■□□□□ 0.36
LINC02228-204ENST00000642115 NUTM2BA6NNL0 878 aaPredicted RBP17.33■□□□□ 0.36
LINC02228-204ENST00000642115 NUTM2EB1AL46 878 aaPredicted RBP17.33■□□□□ 0.36
LINC02228-204ENST00000642115 HMGB1P1B2RPK0 211 aaPredicted RBP17.33■□□□□ 0.36
LINC02228-204ENST00000642115 TNFRSF8P28908 595 aa17.33■□□□□ 0.36
LINC02228-204ENST00000642115 GUCY2DQ02846 1103 aa17.33■□□□□ 0.36
LINC02228-204ENST00000642115 PDE4DQ08499 809 aa17.33■□□□□ 0.36
LINC02228-204ENST00000642115 ZNF507Q8TCN5 953 aa17.33■□□□□ 0.36
LINC02228-204ENST00000642115 FAM205AQ6ZU69 1335 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 TRAPPC3O43617 180 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 CYP2D6P10635 497 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 FCER1AP12319 257 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
LINC02228-204ENST00000642115 ASIC1P78348 528 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 MEA1Q16626 185 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 EBF2Q9HAK2 575 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 BATF3Q9NR55 127 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 TRPC6Q9Y210 931 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 TNS3Q68CZ2 1445 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 PPP1R7Q15435 360 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 LACTB2Q53H82 288 aaPredicted RBP17.32■□□□□ 0.36
LINC02228-204ENST00000642115 IFT20Q8IY31 132 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 MS4A14Q96JA4 679 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 PLAAQ9Y263 795 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 PNPLA7Q6ZV29 1317 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
LINC02228-204ENST00000642115 TSPY2A6NKD2 308 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 SRRM3A6NNA2 597 aaPredicted RBP17.31■□□□□ 0.36
LINC02228-204ENST00000642115 TACC1O75410 805 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 ANP32DO95626 131 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 EEF1GP26641 437 aaKnown RBP17.31■□□□□ 0.36
LINC02228-204ENST00000642115 SUSD4Q5VX71 490 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 ANKRD40Q6AI12 368 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
LINC02228-204ENST00000642115 CACNA2D3Q8IZS8 1091 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 TRIM58Q8NG06 486 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
LINC02228-204ENST00000642115 NAALADL2Q58DX5 795 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 CCT6BQ92526 530 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 GDF3Q9NR23 364 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 MYH7P12883 1935 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 HEXIM1O94992 359 aaKnown RBP17.31■□□□□ 0.36
LINC02228-204ENST00000642115 CHRNDQ07001 517 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 STK4Q13043 487 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 NBPF9Q3BBW0 867 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 THEMIS2Q5TEJ8 643 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 OR2W6PQ8NHA6 318 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 SPAG5Q96R06 1193 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 TMBIM4Q9HC24 238 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 C15orf41Q9Y2V0 281 aa17.31■□□□□ 0.36
LINC02228-204ENST00000642115 PDS5AQ29RF7 1337 aaKnown RBP17.3■□□□□ 0.36
LINC02228-204ENST00000642115 DNAJC8O75937 253 aaPredicted RBP17.3■□□□□ 0.36
LINC02228-204ENST00000642115 SRGNP10124 158 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 PAFAH1B1P43034 410 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 RWDD2BP57060 319 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 ZBED6P86452 979 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 HEATR3Q7Z4Q2 680 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 TCP11Q8WWU5 503 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 SLC12A6Q9UHW9 1150 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 A0A1W2PQC6 194 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
LINC02228-204ENST00000642115 PAK2Q13177 524 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
LINC02228-204ENST00000642115 MIS18BP1Q6P0N0 1132 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 DUSP9Q99956 384 aaKnown RBP17.3■□□□□ 0.36
LINC02228-204ENST00000642115 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 CPSF2Q9P2I0 782 aaKnown RBP17.3■□□□□ 0.36
LINC02228-204ENST00000642115 HYOU1Q9Y4L1 999 aa17.3■□□□□ 0.36
LINC02228-204ENST00000642115 EPHB6O15197 1021 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 SNUPNO95149 360 aaKnown RBP17.29■□□□□ 0.36
LINC02228-204ENST00000642115 PRLRP16471 622 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 LONP1P36776 959 aaKnown RBP17.29■□□□□ 0.36
LINC02228-204ENST00000642115 SF3A3Q12874 501 aaKnown RBP eCLIP17.29■□□□□ 0.36
LINC02228-204ENST00000642115 PPP2R5BQ15173 497 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 PTPROQ16827 1216 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 TTI2Q6NXR4 508 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 RRAGAQ7L523 313 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 TANGO6Q9C0B7 1094 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 PCDHA13Q9Y5I0 950 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 CLTAP09496 248 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 TCP1P17987 556 aaKnown RBP17.29■□□□□ 0.36
LINC02228-204ENST00000642115 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 ZNF570Q96NI8 536 aa17.29■□□□□ 0.36
LINC02228-204ENST00000642115 THAP9Q9H5L6 903 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms