RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 COL9A3Q14050 684 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-225ENST00000641720 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
PHGDH-225ENST00000641720 IQSEC1Q6DN90 963 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 GJD3Q8N144 294 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 KIFC2Q96AC6 838 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 VTA1Q9NP79 307 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 FEM1BQ9UK73 627 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 CACNA1BQ00975 2339 aa8.69□□□□□ -1.02
PHGDH-225ENST00000641720 EPG5Q9HCE0 2579 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 BAZ2BQ9UIF8 2168 aaKnown RBP8.68□□□□□ -1.02
PHGDH-225ENST00000641720 CEP250Q9BV73 2442 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 ASB14A6NK59 587 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 ZNF213O14771 459 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 ORC4O43929 436 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 NBNO60934 754 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 BAIAP3O94812 1187 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 GJB5O95377 273 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 SEC24BO95487 1268 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 FGRP09769 529 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 LINC00271P0C7V0 271 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 EDNRBP24530 442 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 ZP2Q05996 745 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 PDE4BQ07343 736 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 NECTIN1Q15223 517 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 IMMTQ16891 758 aaKnown RBP8.68□□□□□ -1.02
PHGDH-225ENST00000641720 TRIM71Q2Q1W2 868 aaKnown RBP8.68□□□□□ -1.02
PHGDH-225ENST00000641720 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 CREB3L3Q68CJ9 461 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 LRRC47Q8N1G4 583 aaKnown RBP8.68□□□□□ -1.02
PHGDH-225ENST00000641720 SP7Q8TDD2 431 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-225ENST00000641720 STAG1Q8WVM7 1258 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 WNT8BQ93098 351 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 KCNH6Q9H252 994 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 HOMER2Q9NSB8 354 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 CTNNA3Q9UI47 895 aa8.68□□□□□ -1.02
PHGDH-225ENST00000641720 A6NJR5 290 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 B4E1Z4 1266 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 NMT2O60551 498 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 ZBED4O75132 1171 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 REC8O95072 547 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 ARIH2O95376 493 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 SLC3A2P08195 630 aaKnown RBP8.67□□□□□ -1.02
PHGDH-225ENST00000641720 FDX1P10109 184 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 LTBRP36941 435 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 ALDH5A1P51649 535 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-225ENST00000641720 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 RRP12Q5JTH9 1297 aaKnown RBP8.67□□□□□ -1.02
PHGDH-225ENST00000641720 NFRKBQ6P4R8 1299 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 HFE2Q6ZVN8 426 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 EEPD1Q7L9B9 569 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 DENND4AQ7Z401 1863 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 SESTD1Q86VW0 696 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 NEDD1Q8NHV4 660 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 KAT2BQ92831 832 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 COPS5Q92905 334 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 CLIP2Q9UDT6 1046 aa8.67□□□□□ -1.02
PHGDH-225ENST00000641720 E7EWF7 191 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 RANBP6O60518 1105 aaKnown RBP8.66□□□□□ -1.02
PHGDH-225ENST00000641720 KDM4AO75164 1064 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 SUPT20HL2P0C7V6 817 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 BMP3P12645 472 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 HSPA4P34932 840 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 SNAP25P60880 206 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 HTRA4P83105 476 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-225ENST00000641720 TFAP4Q01664 338 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-225ENST00000641720 HIC1Q14526 733 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 TKFCQ3LXA3 575 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 SLFN13Q68D06 897 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 GDF6Q6KF10 455 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-225ENST00000641720 CCDC62Q6P9F0 684 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 CLEC4DQ8WXI8 215 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 KCNB2Q92953 911 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 TRERF1Q96PN7 1200 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 MTG1Q9BT17 334 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-225ENST00000641720 AP5M1Q9H0R1 490 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 RNF41Q9H4P4 317 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-225ENST00000641720 IL17RBQ9NRM6 502 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 TOMM22Q9NS69 142 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 PRR12Q9ULL5 1215 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 ZFHX4Q86UP3 3567 aa8.66□□□□□ -1.02
PHGDH-225ENST00000641720 EP300Q09472 2414 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-225ENST00000641720 LOC102724159A0A0B4J2E5 919 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 TSPY2A6NKD2 308 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 TMEM232C9JQI7 657 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 NFIBO00712 420 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 DCXO43602 365 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 RAD21O60216 631 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 LGR5O75473 907 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 TTLL1O95922 423 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 TSPY3P0CV98 308 aa8.65□□□□□ -1.02
PHGDH-225ENST00000641720 TSPY8P0CW00 308 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms