RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CCT8L2Q96SF2 557 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 TMEM165Q9HC07 324 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 ARPP21Q9UBL0 812 aaPredicted RBP13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 USP14P54578 494 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 USP4Q13107 963 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 SBK1Q52WX2 424 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 CNGA4Q8IV77 575 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 ZNF473Q8WTR7 871 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 GPR75-ASB3A0A0A6YYF3 556 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 NR1D1P20393 614 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 TMOD1P28289 359 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 PPP4CP60510 307 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 CHP1Q99653 195 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 BLZF1Q9H2G9 400 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
RBFOX1-224ENST00000641259 IFNAR2P48551 515 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 GUCY2DQ02846 1103 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 CRYMQ14894 314 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 CACNA2D3Q8IZS8 1091 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 HDAC7Q8WUI4 952 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 ZC3H12CQ9C0D7 883 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 COA1Q9GZY4 146 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 IL17RBQ9NRM6 502 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 GAKO14976 1311 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 IKBKBO14920 756 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 TUBBP07437 444 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 LSP1P33241 339 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 SCNN1DP51172 638 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 SESN3P58005 492 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 LMBR1Q8WVP7 490 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 MCM8Q9UJA3 840 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 FLT1P17948 1338 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 H0YIN7 160 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 KRT86O43790 486 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 HMGB2P26583 209 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 SLC8A1P32418 973 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 KIF5BP33176 963 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 FXR1P51114 621 aaKnown RBP eCLIP13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 POSTNQ15063 836 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 NLRP14Q86W24 1093 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 CEP120Q8N960 986 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 PLIN2Q99541 437 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.32
RBFOX1-224ENST00000641259 ORC4O43929 436 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 GSTO1P78417 241 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 ARID5AQ03989 594 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 KIF5AQ12840 1032 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 CCDC63Q8NA47 563 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 FAXDC2Q96IV6 333 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 EPN1Q9Y6I3 576 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 USH1CQ9Y6N9 552 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 AKR1B10O60218 316 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 CPP00450 1065 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 RTN1Q16799 776 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 TDRD12Q587J7 1177 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 ETAA1Q9NY74 926 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 ERICH2A1L162 156 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 TROAPQ12815 778 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 TSC22D3Q99576 134 aa13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 MAGEC2Q9UBF1 373 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-224ENST00000641259 MYH1P12882 1939 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 BAG3O95817 575 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 IARSP41252 1262 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 PREPLQ4J6C6 727 aaPredicted RBP13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 STYK1Q6J9G0 422 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 FAM47EQ6ZV65 393 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 RTEL1Q9NZ71 1219 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 RPS6KA5O75582 802 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 TBC1D8BQ0IIM8 1120 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 KRT40Q6A162 431 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
RBFOX1-224ENST00000641259 MGARPQ8TDB4 240 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms