RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CEP104O60308 925 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 PAK2Q13177 524 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 SNX1Q13596 522 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 KRT71Q3SY84 523 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 ADGRA1Q86SQ6 560 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 TAX1BP1Q86VP1 789 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 KRT23Q9C075 422 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 N4BP2Q86UW6 1770 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 TNS3Q68CZ2 1445 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 FAM205AQ6ZU69 1335 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 ANO9A1A5B4 782 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 PDE8AO60658 829 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 KLRC1P26715 233 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 SLCO1A2P46721 670 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 DHX9Q08211 1270 aaKnown RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 TTI2Q6NXR4 508 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 FAM43BQ6ZT52 329 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 CACNA2D3Q8IZS8 1091 aa15.16■□□□□ 0.02
SCARB2-227ENST00000640957 FNBP4Q8N3X1 1017 aaPredicted RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 SRBD1Q8N5C6 995 aaKnown RBP15.16■□□□□ 0.02
SCARB2-227ENST00000640957 RGPD5Q99666 1765 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 PDS5AQ29RF7 1337 aaKnown RBP15.15■□□□□ 0.02
SCARB2-227ENST00000640957 ERVK-9P63128 1117 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-227ENST00000640957 MGARPQ8TDB4 240 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 ADAMTS1Q9UHI8 967 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 FBXL5Q9UKA1 691 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 TCP1P17987 556 aaKnown RBP15.15■□□□□ 0.02
SCARB2-227ENST00000640957 ADCY1Q08828 1119 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
SCARB2-227ENST00000640957 MEA1Q16626 185 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 ZCWPW1Q9H0M4 648 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 NOD2Q9HC29 1040 aa15.15■□□□□ 0.02
SCARB2-227ENST00000640957 KCNB1Q14721 858 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 NPY5RQ15761 445 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 MIIPQ5JXC2 388 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 SLC4A9Q96Q91 983 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 TTYH3Q9C0H2 523 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 TCRBV5S4A2TA0A5A2 114 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 FOXO6A8MYZ6 492 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 DAPK3O43293 454 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 KCNQ2O43526 872 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 AP1G2O75843 785 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 ITGA4P13612 1032 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 IFFO1Q0D2I5 559 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 TRIM68Q6AZZ1 485 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 SPICE1Q8N0Z3 855 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 AMACRQ9UHK6 382 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 PNMA2Q9UL42 364 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 A0A1B0GUA9 196 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 CTNND1O60716 968 aaKnown RBP15.14■□□□□ 0.01
SCARB2-227ENST00000640957 PRPF4BQ13523 1007 aaKnown RBP15.14■□□□□ 0.01
SCARB2-227ENST00000640957 UAP1Q16222 522 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-227ENST00000640957 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 NOX5Q96PH1 765 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 DISC1Q9NRI5 854 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 ATP8A1Q9Y2Q0 1164 aa15.14■□□□□ 0.01
SCARB2-227ENST00000640957 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 DIAPH2O60879 1101 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 EPB41P11171 864 aaKnown RBP15.13■□□□□ 0.01
SCARB2-227ENST00000640957 UBE3CQ15386 1083 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 UBAP2Q5T6F2 1119 aaKnown RBP15.13■□□□□ 0.01
SCARB2-227ENST00000640957 GJA10Q969M2 543 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 ELAC2Q9BQ52 826 aaKnown RBP15.13■□□□□ 0.01
SCARB2-227ENST00000640957 RMND1Q9NWS8 449 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 UQCRFS1P1P0C7P4 283 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 PLCG1P19174 1290 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 KIAA0753Q2KHM9 967 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 DTHD1Q6ZMT9 781 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 PANK4Q9NVE7 773 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 TFCP2L1Q9NZI6 479 aa15.13■□□□□ 0.01
SCARB2-227ENST00000640957 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 ZNF844Q08AG5 666 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 BYSLQ13895 437 aaKnown RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 RAPGEF1Q13905 1077 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 LRRC14Q15048 493 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 DDB1Q16531 1140 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 CCDC170Q8IYT3 715 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 P2RX5Q93086 422 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 KLRC4O43908 158 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 EEF1GP26641 437 aaKnown RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 SARNPP82979 210 aaKnown RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 THEMIS2Q5TEJ8 643 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 C6orf89Q6UWU4 347 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 CAVIN3Q969G5 261 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 CNNM2Q9H8M5 875 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 TRIM33Q9UPN9 1127 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 GOLGA8HP0CJ92 632 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 TECP42680 631 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 POLR2FP61218 127 aaKnown RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 KCNJ2P63252 427 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms