RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 CYP39A1Q9NYL5 469 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 CTNNA3Q9UI47 895 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 INSL6Q9Y581 213 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 ZBED9Q6R2W3 1325 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 MYH7P12883 1935 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 ZFHX4Q86UP3 3567 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 A6NJR5 290 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 LOC730098B7Z3J9 87 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 TBX10O75333 385 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 LGR5O75473 907 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 SURF6O75683 361 aaKnown RBP9.72□□□□□ -0.85
SCARB2-226ENST00000640916 BCAR3O75815 825 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 SELPP16109 830 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 RASA1P20936 1047 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 GTF2F1P35269 517 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCARB2-226ENST00000640916 CPT1AP50416 773 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 GPM6BQ13491 265 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 PTGISQ16647 500 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 PTPROQ16827 1216 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 SUGP1Q8IWZ8 645 aaKnown RBP9.72□□□□□ -0.85
SCARB2-226ENST00000640916 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 ARHGAP45Q92619 1136 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 COPS5Q92905 334 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 WNT8BQ93098 351 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 MKL1Q969V6 931 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 POP1Q99575 1024 aaKnown RBP9.72□□□□□ -0.85
SCARB2-226ENST00000640916 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 FEM1BQ9UK73 627 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
SCARB2-226ENST00000640916 MED19A0JLT2 244 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-226ENST00000640916 STXBP3O00186 592 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 SNPHO15079 494 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 MBD4O95243 580 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 LINC00271P0C7V0 271 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 CKBP12277 381 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 ID4P47928 161 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 SMAD4Q13485 552 aaKnown RBP9.71□□□□□ -0.86
SCARB2-226ENST00000640916 CBX2Q14781 532 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-226ENST00000640916 TRIM71Q2Q1W2 868 aaKnown RBP9.71□□□□□ -0.86
SCARB2-226ENST00000640916 SESTD1Q86VW0 696 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 OR6J1Q8NGC5 347 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 MSLNLQ96KJ4 702 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 CLIP2Q9UDT6 1046 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 PCDHGA4Q9Y5G9 962 aa9.71□□□□□ -0.86
SCARB2-226ENST00000640916 LINC01565O15544 149 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 HOXB1P14653 301 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-226ENST00000640916 NBL1P41271 181 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 OS9Q13438 667 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-226ENST00000640916 IKBKEQ14164 716 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 RPAP2Q8IXW5 612 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-226ENST00000640916 TMEM192Q8IY95 271 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 KAT2BQ92831 832 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 SAMD11Q96NU1 681 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 CTDP1Q9Y5B0 961 aaPredicted RBP9.7□□□□□ -0.86
SCARB2-226ENST00000640916 GVINP1Q7Z2Y8 2422 aa9.7□□□□□ -0.86
SCARB2-226ENST00000640916 NCK2O43639 380 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 KPNA6O60684 536 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 EFCAB14O75071 495 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 PARNO95453 639 aaKnown RBP9.69□□□□□ -0.86
SCARB2-226ENST00000640916 EYA4O95677 639 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 PDGFBP01127 241 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-226ENST00000640916 FDX1P10109 184 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 ALAS1P13196 640 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 ADD2P35612 726 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 ALDH5A1P51649 535 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-226ENST00000640916 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
SCARB2-226ENST00000640916 SNAP25P60880 206 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 SIGLEC14Q08ET2 396 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 ADAM15Q13444 863 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 TTF1Q15361 905 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-226ENST00000640916 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 ZNF618Q5T7W0 954 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 FBXO11Q86XK2 927 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 GMCL1P1Q8NEA9 526 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 CRBNQ96SW2 442 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 OSBPL7Q9BZF2 842 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 IRF2BPLQ9H1B7 796 aa9.69□□□□□ -0.86
SCARB2-226ENST00000640916 TMEM232C9JQI7 657 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 C5orf67F2Z3F1 127 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 TULP1O00294 542 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-226ENST00000640916 GOLIM4O00461 696 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 GRM6O15303 877 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 ARIH2O95376 493 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 BMP3P12645 472 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 TRIM27P14373 513 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 CAMK1Q14012 370 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 BAATQ14032 418 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-226ENST00000640916 HIC1Q14526 733 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 LRRC47Q8N1G4 583 aaKnown RBP9.68□□□□□ -0.86
SCARB2-226ENST00000640916 CCDC155Q8N6L0 562 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 DBF4BQ8NFT6 615 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 CEP95Q96GE4 821 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 MTMR4Q9NYA4 1195 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 CLEC1BQ9P126 229 aa9.68□□□□□ -0.86
SCARB2-226ENST00000640916 CD207Q9UJ71 328 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms