RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 KCNA10Q16322 511 aa30.68■■■□□ 2.5
VEGFA-231ENST00000640499 FERMT2Q96AC1 680 aa30.68■■■□□ 2.5
VEGFA-231ENST00000640499 RBM27Q9P2N5 1060 aaKnown RBP30.68■■■□□ 2.5
VEGFA-231ENST00000640499 KBTBD13C9JR72 458 aa30.67■■■□□ 2.5
VEGFA-231ENST00000640499 CLK2P49760 499 aaKnown RBP30.67■■■□□ 2.5
VEGFA-231ENST00000640499 LRRC26Q2I0M4 334 aa30.67■■■□□ 2.5
VEGFA-231ENST00000640499 TSEN34Q9BSV6 310 aaKnown RBP30.67■■■□□ 2.5
VEGFA-231ENST00000640499 TXNP10599 105 aaKnown RBP30.66■■■□□ 2.5
VEGFA-231ENST00000640499 ADCY7P51828 1080 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 ACLYP53396 1101 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 HTATIP2Q9BUP3 242 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 BACH2Q9BYV9 841 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 TMEM260Q9NX78 707 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 PCDHA6Q9UN73 950 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 PCDHA8Q9Y5H6 950 aa30.66■■■□□ 2.5
VEGFA-231ENST00000640499 CPLX1O14810 134 aa30.65■■■□□ 2.5
VEGFA-231ENST00000640499 CCND2P30279 289 aa30.65■■■□□ 2.5
VEGFA-231ENST00000640499 SSRP1Q08945 709 aaKnown RBP30.65■■■□□ 2.5
VEGFA-231ENST00000640499 LY6KQ17RY6 165 aa30.65■■■□□ 2.5
VEGFA-231ENST00000640499 GNASQ5JWF2 1037 aa30.65■■■□□ 2.5
VEGFA-231ENST00000640499 AIFM3Q96NN9 605 aa30.65■■■□□ 2.5
VEGFA-231ENST00000640499 ZMYND12Q9H0C1 365 aa30.65■■■□□ 2.5
VEGFA-231ENST00000640499 DDX41Q9UJV9 622 aaKnown RBP30.65■■■□□ 2.5
VEGFA-231ENST00000640499 ESYT2A0FGR8 921 aa30.64■■■□□ 2.5
VEGFA-231ENST00000640499 AKAP17AQ02040 695 aaKnown RBP30.64■■■□□ 2.5
VEGFA-231ENST00000640499 TTLL4Q14679 1199 aa30.64■■■□□ 2.5
VEGFA-231ENST00000640499 DPF3Q92784 378 aa30.64■■■□□ 2.5
VEGFA-231ENST00000640499 GTF3C6Q969F1 213 aa30.64■■■□□ 2.5
VEGFA-231ENST00000640499 PGBD1Q96JS3 809 aa30.64■■■□□ 2.5
VEGFA-231ENST00000640499 VPS54Q9P1Q0 977 aa30.64■■■□□ 2.5
VEGFA-231ENST00000640499 A0A1W2PQ45 241 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-231ENST00000640499 A0A1W2PQY0 241 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 ASGR1P07306 291 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 ATN1P54259 1190 aaPredicted RBP30.63■■■□□ 2.49
VEGFA-231ENST00000640499 SP2Q02086 613 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 SEMA3FQ13275 785 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 FSCN1Q16658 493 aaKnown RBP30.63■■■□□ 2.49
VEGFA-231ENST00000640499 PCNX4Q63HM2 1172 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 SLC39A5Q6ZMH5 540 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 TBC1D32Q96NH3 1257 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 AP5M1Q9H0R1 490 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 SPC25Q9HBM1 224 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 RTEL1Q9NZ71 1219 aa30.63■■■□□ 2.49
VEGFA-231ENST00000640499 NKRFO15226 690 aaKnown RBP eCLIP30.62■■■□□ 2.494e-7■□□□□ 10.1
VEGFA-231ENST00000640499 TEX2Q8IWB9 1127 aa30.62■■■□□ 2.49
VEGFA-231ENST00000640499 TRIM22Q8IYM9 498 aa30.62■■■□□ 2.49
VEGFA-231ENST00000640499 INPP4AQ96PE3 977 aaPredicted RBP30.62■■■□□ 2.49
VEGFA-231ENST00000640499 MOXD2PA6NHM9 499 aa30.61■■■□□ 2.49
VEGFA-231ENST00000640499 DEXIO95424 95 aa30.61■■■□□ 2.49
VEGFA-231ENST00000640499 ARHGAP1Q07960 439 aa30.61■■■□□ 2.49
VEGFA-231ENST00000640499 SNX17Q15036 470 aa30.61■■■□□ 2.49
VEGFA-231ENST00000640499 OR6J1Q8NGC5 347 aa30.61■■■□□ 2.49
VEGFA-231ENST00000640499 BCAS3Q9H6U6 928 aa30.61■■■□□ 2.49
VEGFA-231ENST00000640499 FDPSP14324 419 aaKnown RBP30.6■■■□□ 2.49
VEGFA-231ENST00000640499 CPLX2Q6PUV4 134 aaKnown RBP30.6■■■□□ 2.49
VEGFA-231ENST00000640499 PCSK9Q8NBP7 692 aaKnown RBP30.6■■■□□ 2.49
VEGFA-231ENST00000640499 SH3GLB2Q9NR46 395 aa30.6■■■□□ 2.49
VEGFA-231ENST00000640499 LIMCH1Q9UPQ0 1083 aa30.6■■■□□ 2.49
VEGFA-231ENST00000640499 SPDYE3A6NKU9 549 aa30.59■■■□□ 2.49
VEGFA-231ENST00000640499 NPY5RQ15761 445 aa30.59■■■□□ 2.49
VEGFA-231ENST00000640499 JAKMIP3Q5VZ66 844 aa30.59■■■□□ 2.49
VEGFA-231ENST00000640499 XRRA1Q6P2D8 792 aa30.59■■■□□ 2.49
VEGFA-231ENST00000640499 ANO3Q9BYT9 981 aa30.59■■■□□ 2.49
VEGFA-231ENST00000640499 MRVI1Q9Y6F6 885 aa30.59■■■□□ 2.49
VEGFA-231ENST00000640499 STK36Q9NRP7 1315 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 SPATA31C2B4DYI2 1134 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 STAM2O75886 525 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 ITGB5P18084 799 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 ICAM3P32942 547 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 RABEP1Q15276 862 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 CXCL17Q6UXB2 119 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 NSUN7Q8NE18 718 aaKnown RBP30.58■■■□□ 2.49
VEGFA-231ENST00000640499 GLT8D2Q9H1C3 349 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 UPF2Q9HAU5 1272 aaKnown RBP30.58■■■□□ 2.49
VEGFA-231ENST00000640499 PCDH10Q9P2E7 1040 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 UBIAD1Q9Y5Z9 338 aa30.58■■■□□ 2.49
VEGFA-231ENST00000640499 MYH7BA7E2Y1 1941 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 A6NJR5 290 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 EVI5O60447 810 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 CDKL5O76039 1030 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 FOSP01100 380 aaPredicted RBP30.57■■■□□ 2.48
VEGFA-231ENST00000640499 C1orf53Q5VUE5 145 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 RASGRP4Q8TDF6 673 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 CCDC12Q8WUD4 166 aaPredicted RBP30.57■■■□□ 2.48
VEGFA-231ENST00000640499 CRYGNQ8WXF5 182 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 C6orf50Q9HD87 102 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 GJB4Q9NTQ9 266 aa30.57■■■□□ 2.48
VEGFA-231ENST00000640499 GRIN2DO15399 1336 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 H0YGN5 161 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 GH1P01241 217 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 UBA1P22314 1058 aaKnown RBP30.56■■■□□ 2.48
VEGFA-231ENST00000640499 RTP1P59025 263 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 AP3B2Q13367 1082 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 C7orf61Q8IZ16 206 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 AFG1LQ8WV93 481 aa30.56■■■□□ 2.48
VEGFA-231ENST00000640499 EDIL3O43854 480 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 JAK2O60674 1132 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 CD2BP2O95400 341 aaKnown RBP30.55■■■□□ 2.48
VEGFA-231ENST00000640499 TGFB3P10600 412 aa30.55■■■□□ 2.48
VEGFA-231ENST00000640499 SREBF1P36956 1147 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms