RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CCDC181Q5TID7 509 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 GALNT17Q6IS24 598 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 LRRC47Q8N1G4 583 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 PURBQ96QR8 312 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 SIK3Q9Y2K2 1263 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 MCM3P25205 808 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 GNA11P29992 359 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 MAGEA1P43355 309 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 CACNA2D4Q7Z3S7 1137 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 SPATA4Q8NEY3 305 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 TRIM58Q8NG06 486 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 ANKS1AQ92625 1134 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 PNMA5Q96PV4 448 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 CUEDC2Q9H467 287 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 JRKLQ9Y4A0 524 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 KIAA1551Q9HCM1 1747 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 ANO9A1A5B4 782 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 TARSL2A2RTX5 802 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 TNNI2P48788 182 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 AARSP49588 968 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■■□□ 15.9
HNRNPU-228ENST00000640306 PPARDQ03181 441 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 LARP4BQ92615 738 aaKnown RBP18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 OSBPL9Q96SU4 736 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 VIPAS39Q9H9C1 493 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 TM4SF1P30408 202 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 CENPPQ6IPU0 288 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 SNX29Q8TEQ0 813 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 SLC1A4P43007 532 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 UBE2SQ16763 222 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 WDR66Q8TBY9 1149 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 MTMR8Q96EF0 704 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 RPGRIP1Q96KN7 1286 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
HNRNPU-228ENST00000640306 GOLGA6CA6NDK9 693 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 GOLGA6DP0CG33 693 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 CCDC70Q6NSX1 233 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 NELFCDQ8IXH7 590 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 DDX12PQ92771 950 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 GOLGA6AQ9NYA3 693 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 ESYT3A0FGR9 886 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 PTPROQ16827 1216 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 SPZ1Q9BXG8 430 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
HNRNPU-228ENST00000640306 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.53
HNRNPU-228ENST00000640306 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.53
HNRNPU-228ENST00000640306 PICALMQ13492 652 aa18.33■□□□□ 0.53
HNRNPU-228ENST00000640306 MAGEF1Q9HAY2 307 aa18.33■□□□□ 0.53
HNRNPU-228ENST00000640306 PACSIN2Q9UNF0 486 aaPredicted RBP18.33■□□□□ 0.53
HNRNPU-228ENST00000640306 LAMB1P07942 1786 aa18.33■□□□□ 0.53
HNRNPU-228ENST00000640306 ECM1Q16610 540 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 MAN2A1Q16706 1144 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 FAM76AQ8TAV0 307 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 RTFDC1Q9BY42 306 aaPredicted RBP18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 FGFBP2Q9BYJ0 223 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 RBM12Q9NTZ6 932 aaKnown RBP18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 FAM184BQ9ULE4 1060 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 BTAF1O14981 1849 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 LAMB2P55268 1798 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 A0A1W2PQJ5 194 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 MARCH6O60337 910 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 IQCEQ6IPM2 695 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 ZNF662Q6ZS27 426 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 UNC13DQ70J99 1090 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 TSEN2Q8NCE0 465 aaKnown RBP18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 ALS2CR12Q96Q35 445 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 NARFQ9UHQ1 456 aa18.33■□□□□ 0.52
HNRNPU-228ENST00000640306 TRAF5O00463 557 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 RAD21O60216 631 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 FTCDO95954 541 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 DNAAF5Q86Y56 855 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 AENQ8WTP8 325 aaKnown RBP18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 TSPYL1Q9H0U9 437 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 FAM170AA1A519 330 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 TRIM37O94972 964 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 SLURP2P0DP57 97 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 FIGNQ5HY92 759 aa18.32■□□□□ 0.52
HNRNPU-228ENST00000640306 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 BAP1Q92560 729 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 ZHX3Q9H4I2 956 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 HYOU1Q9Y4L1 999 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 F8W031 263 aaPredicted RBP18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 EDIL3O43854 480 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 TMEM266Q2M3C6 531 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 KCTD16Q68DU8 428 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 IFT81Q8WYA0 676 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 MTMR9Q96QG7 549 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 SNED1Q8TER0 1413 aa18.31■□□□□ 0.52
HNRNPU-228ENST00000640306 IRS2Q9Y4H2 1338 aa18.3■□□□□ 0.52
HNRNPU-228ENST00000640306 NPHP3-ACAD11A0A0J9YXS1 232 aa18.3■□□□□ 0.52
HNRNPU-228ENST00000640306 SLC16A2P36021 539 aa18.3■□□□□ 0.52
HNRNPU-228ENST00000640306 CCT5P48643 541 aa18.3■□□□□ 0.52
HNRNPU-228ENST00000640306 POLR2FP61218 127 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms