RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 SOGA3Q5TF21 947 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
SPIN3-236ENST00000640131 TXKP42681 527 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 GNAQP50148 359 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 HHATQ5VTY9 493 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
SPIN3-236ENST00000640131 CEP57Q86XR8 500 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 CRAMP1Q96RY5 1269 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 LMCD1Q9NZU5 365 aa13.73□□□□□ -0.21
SPIN3-236ENST00000640131 NRDCO43847 1150 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 BMP15O95972 392 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 RPN1P04843 607 aaKnown RBP13.72□□□□□ -0.21
SPIN3-236ENST00000640131 PDHBP11177 359 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 TXLNAP40222 546 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 BEND6Q5SZJ8 279 aaPredicted RBP13.72□□□□□ -0.21
SPIN3-236ENST00000640131 SPECC1LQ69YQ0 1117 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 CCDC148Q8NFR7 591 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 SOWAHDA6NJG2 315 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 PLCG2P16885 1265 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 TNNI2P48788 182 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 NAALADL2Q58DX5 795 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 CDC42EP5Q6NZY7 148 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 CEP112Q8N8E3 955 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 TC2NQ8N9U0 490 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 NELFBQ8WX92 580 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 IRX2Q9BZI1 471 aaPredicted RBP13.72□□□□□ -0.21
SPIN3-236ENST00000640131 DISC1Q9NRI5 854 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
SPIN3-236ENST00000640131 M0R2N6 131 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 TDP2O95551 362 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 PRCPP42785 496 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 FNTAP49354 379 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
SPIN3-236ENST00000640131 C15orf52Q6ZUT6 534 aaKnown RBP13.71□□□□□ -0.21
SPIN3-236ENST00000640131 KIAA1328Q86T90 577 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 GOLGA1Q92805 767 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 GAKO14976 1311 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 FANCGO15287 622 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 PLCG1P19174 1290 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 RBL2Q08999 1139 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 CCDC178Q5BJE1 867 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 CEP85LQ5SZL2 805 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 SPATA1Q5VX52 437 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 IGSF22Q8N9C0 903 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 TRIML1Q8N9V2 468 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
SPIN3-236ENST00000640131 GDF11O95390 407 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 NONOQ15233 471 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 CDCA2Q69YH5 1023 aaPredicted RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 NCAPG2Q86XI2 1143 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 MSL3Q8N5Y2 521 aaKnown RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 GSDMAQ96QA5 445 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 MAF1Q9H063 256 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 KCNB1Q14721 858 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 REXO1Q8N1G1 1221 aaKnown RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 COA1Q9GZY4 146 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 C6orf50Q9HD87 102 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 LZTFL1Q9NQ48 299 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 TCP11L1Q9NUJ3 509 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 DDX20Q9UHI6 824 aaKnown RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 POTEMA6NI47 508 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 N4BP3O15049 544 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 CASP14P31944 242 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 NR1I3Q14994 352 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 TRIM65Q6PJ69 517 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 APTXQ7Z2E3 356 aaKnown RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 HNRNPLLQ8WVV9 542 aaKnown RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 NUP88Q99567 741 aaPredicted RBP13.7□□□□□ -0.22
SPIN3-236ENST00000640131 KLC4Q9NSK0 619 aa13.7□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L10C9JJH3 530 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 SLC37A4O43826 429 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 ERCC5P28715 1186 aaPredicted RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 KRT31Q15323 416 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 CABP7Q86V35 215 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 TSPAN18Q96SJ8 248 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 RMI1Q9H9A7 625 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms