RNA–Protein interactions for RNA: ENST00000639673.1

TRIM43B-202, Transcript of tripartite motif containing 43B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43B, Length 1,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43B-202ENST00000639673 APOA5Q6Q788 366 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 TMTC3Q6ZXV5 915 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 PPP1R13LQ8WUF5 828 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
TRIM43B-202ENST00000639673 KIAA1217Q5T5P2 1943 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 A6NJR5 290 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 RGS20O76081 388 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 EPHB4P54760 987 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 SHHQ15465 462 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 SYNE3Q6ZMZ3 975 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 SAMD3Q8N6K7 520 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 KCNB2Q92953 911 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 JAKMIP1Q96N16 626 aaKnown RBP11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 PPP1R12CQ9BZL4 782 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 POLR3EQ9NVU0 708 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 SNX14Q9Y5W7 946 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 MRVI1Q9Y6F6 885 aa11.47□□□□□ -0.57
TRIM43B-202ENST00000639673 KLF18A0A0U1RQI7 1052 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 TLR3O15455 904 aaKnown RBP11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 SORBS3O60504 671 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 B4GALT4O60513 344 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 TIMP1P01033 207 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 CD4P01730 458 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 MMP3P08254 477 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 ARHGAP1Q07960 439 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 BRDTQ58F21 947 aaPredicted RBP11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 USP17L6PQ6QN14 398 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 VSIG10LQ86VR7 867 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 AFG1LQ8WV93 481 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 TRPV6Q9H1D0 765 aa11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.57
TRIM43B-202ENST00000639673 MEIS2O14770 477 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 ZBTB43O43298 467 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 REC8O95072 547 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 GH1P01241 217 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 HMGB1P09429 215 aaKnown RBP11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 FPGSQ05932 587 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 RTN1Q16799 776 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 FRMPD4Q14CM0 1322 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 UMODL1Q5DID0 1318 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.58
TRIM43B-202ENST00000639673 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 CCND2P30279 289 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 CHMP4BP1P59074 171 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 FGD1P98174 961 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 MFSD5Q6N075 450 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 BLOC1S2Q6QNY1 142 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 Q6ZUG5 572 aa11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 ALDH8A1Q9H2A2 487 aaPredicted RBP11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 TRMT13Q9NUP7 481 aaKnown RBP11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
TRIM43B-202ENST00000639673 SCN10AQ9Y5Y9 1956 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 PIK3CDO00329 1044 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 CSF2RAP15509 400 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 UBA1P22314 1058 aaKnown RBP11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 CDC27P30260 824 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 CYP2C18P33260 490 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 MRPS9P82933 396 aaKnown RBP11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 SP2Q02086 613 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 APOBRQ0VD83 1088 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 NBPF20Q3BBV1 942 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 FAM47CQ5HY64 1035 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 BRF1Q92994 677 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 CUL5Q93034 780 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 HIPK3Q9H422 1215 aa11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
TRIM43B-202ENST00000639673 KPNA6O60684 536 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 GGPS1O95749 300 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 CASTP20810 708 aaKnown RBP11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 RPS6KB1P23443 525 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 FUT2Q10981 343 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 UBE2SQ16763 222 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 Q7L0L9 218 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 DHX37Q8IY37 1157 aaKnown RBP11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 EMID1Q96A84 441 aaPredicted RBP11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 SEZ6LQ9BYH1 1024 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 PSTPIP2Q9H939 334 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 RTEL1Q9NZ71 1219 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 LAMA2P24043 3122 aaKnown RBP11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 ZNF286BP0CG31 522 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 ACRP10323 421 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 CYP2C9P11712 490 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 METAP2P50579 478 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 CCL23P55773 120 aa11.43□□□□□ -0.58
TRIM43B-202ENST00000639673 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms