RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TRIM43BA6NCK2 446 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SPDYE16A6NNV3 312 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DAB1O75553 588 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 GFPT2O94808 682 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SLC4A1P02730 911 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CLTAP09496 248 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF598Q86UK7 904 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 TBC1D21Q8IYX1 336 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 NCLNQ969V3 563 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 FGD4Q96M96 766 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MNTQ99583 582 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 NCOR1P1Q9H4R4 102 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 PLEKHA5Q9HAU0 1116 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DMAP1Q9NPF5 467 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ANO10Q9NW15 660 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 EHD2Q9NZN4 543 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MYH7BA7E2Y1 1941 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 POLR1AO95602 1720 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 TNFAIP3P21580 790 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 VPS41P49754 854 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ATN1P54259 1190 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 MSLNQ13421 630 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 METTL11BQ5VVY1 283 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CCDC102BQ68D86 513 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 TAS1R3Q7RTX0 852 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SLC22A8Q8TCC7 542 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SAMD11Q96NU1 681 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SIKE1Q9BRV8 207 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 OSBPL5Q9H0X9 879 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CYP4F12Q9HCS2 524 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ZFATQ9P243 1243 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 STAP2Q9UGK3 403 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SLC4A7Q9Y6M7 1214 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SH3TC1Q8TE82 1336 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 GOLGA8RI6L899 631 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 TUBBP07437 444 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 PLCG2P16885 1265 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ST13P50502 369 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CD83Q01151 205 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 CCNG2Q16589 344 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 LRSAM1Q6UWE0 723 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SPATA24Q86W54 205 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 ST13P5Q8NFI4 369 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SGK3Q96BR1 496 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 EIF2AK1Q9BQI3 630 aaKnown RBP4.69□□□□□ -1.66
SCN3A-209ENST00000639244 KIFC3Q9BVG8 833 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 TRIM10Q9UDY6 481 aa4.69□□□□□ -1.66
SCN3A-209ENST00000639244 SYNDIG1LA6NDD5 238 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 STX6O43752 255 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 SEC24DO94855 1032 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 GSTA2P09210 222 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CKBP12277 381 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MX2P20592 715 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CTHP32929 405 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 HADHAP40939 763 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 KDELC1Q6UW63 502 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF804AQ7Z570 1209 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 OR6C65A6NJZ3 312 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ARF4P18085 180 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MTHFRP42898 656 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 PICALMQ13492 652 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 STK32CQ86UX6 486 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 OR52K2Q8NGK3 314 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MOV10L1Q9BXT6 1211 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 DDX18Q9NVP1 670 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 VPS18Q9P253 973 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZBTB1Q9Y2K1 713 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 GIT1Q9Y2X7 761 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 IL33O95760 270 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 NPPAP01160 153 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CTNNA2P26232 953 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CTCFP49711 727 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 BTG3Q14201 252 aaPredicted RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 SQLEQ14534 574 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 KLC3Q6P597 504 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CDC26Q8NHZ8 85 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 DQX1Q8TE96 717 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 AGXT2Q9BYV1 514 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZC4H2Q9NQZ6 224 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ABCF3Q9NUQ8 709 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 HERC5Q9UII4 1024 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 DUSP12Q9UNI6 340 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 GNEQ9Y223 722 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 SLC4A2P04920 1241 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 STMN1P16949 149 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 EEF1GP26641 437 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ZNF76P36508 570 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 HAAOP46952 286 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MASP1P48740 699 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ALDH18A1P54886 795 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 PIP4K2BP78356 416 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 MTMR3Q13615 1198 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 RASGRF1Q13972 1273 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 CCDC13Q8IYE1 715 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 RABGGTAQ92696 567 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ALPK1Q96QP1 1244 aa4.68□□□□□ -1.66
SCN3A-209ENST00000639244 HNRNPABQ99729 332 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 ELAC1Q9H777 363 aaKnown RBP4.68□□□□□ -1.66
SCN3A-209ENST00000639244 EURLQ9NYK6 297 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms