RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KRT14P02533 472 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
SNIP1-204ENST00000638725 TDRD12Q587J7 1177 aaKnown RBP12.09□□□□□ -0.47
SNIP1-204ENST00000638725 KCTD16Q68DU8 428 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 PDXDC1Q6P996 788 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 GLIS3Q8NEA6 775 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 SH3RF3Q8TEJ3 882 aaPredicted RBP12.09□□□□□ -0.47
SNIP1-204ENST00000638725 KAT2BQ92831 832 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 CAVIN3Q969G5 261 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 FAM107BQ9H098 131 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 ZPR1O75312 459 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 ERLIN2O94905 339 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 GLI1P08151 1106 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 CARSP49589 748 aaKnown RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 ALS2CLQ60I27 953 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 CACNA2D4Q7Z3S7 1137 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 NLRC4Q9NPP4 1024 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 FAM153BP0C7A2 387 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 LRRC41Q15345 812 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 HGSNATQ68CP4 663 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 UNC13DQ70J99 1090 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 CCDC43Q96MW1 224 aaKnown RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 NOX5Q96PH1 765 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 PNMA5Q96PV4 448 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 TMEM260Q9NX78 707 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.48
SNIP1-204ENST00000638725 FAM153AQ9UHL3 310 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 NFU1Q9UMS0 254 aa12.08□□□□□ -0.48
SNIP1-204ENST00000638725 TNFRSF8P28908 595 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 SKOR1P84550 965 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 LARP4BQ92615 738 aaKnown RBP12.07□□□□□ -0.48
SNIP1-204ENST00000638725 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 FTCDO95954 541 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
SNIP1-204ENST00000638725 NNTQ13423 1086 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 USP17L2Q6R6M4 530 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
SNIP1-204ENST00000638725 CCDC24Q8N4L8 307 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 EPB41L5Q9HCM4 733 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 SAP30BPQ9UHR5 308 aaKnown RBP12.07□□□□□ -0.48
SNIP1-204ENST00000638725 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 HEXIM1O94992 359 aaKnown RBP12.07□□□□□ -0.48
SNIP1-204ENST00000638725 RASA1P20936 1047 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 CFAP221Q4G0U5 840 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 GDF3Q9NR23 364 aa12.07□□□□□ -0.48
SNIP1-204ENST00000638725 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 ROBO3Q96MS0 1386 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 ABCB11O95342 1321 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 SSU72P8A0A1W2PR75 194 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 POTEMA6NI47 508 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 TLR2O60603 784 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 PALMO75781 387 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 GNA11P29992 359 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 MMS22LQ6ZRQ5 1243 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 PIGSQ96S52 555 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 PACSIN2Q9UNF0 486 aaPredicted RBP12.06□□□□□ -0.48
SNIP1-204ENST00000638725 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 NDUFAB1O14561 156 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 SLC37A4O43826 429 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
SNIP1-204ENST00000638725 GUCY2FP51841 1108 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 RNASE9P60153 205 aaKnown RBP12.06□□□□□ -0.48
SNIP1-204ENST00000638725 APBA1Q02410 837 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 LRRC63Q05C16 580 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 CALCRLQ16602 461 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 GLE1Q53GS7 698 aaKnown RBP12.06□□□□□ -0.48
SNIP1-204ENST00000638725 CFAP58Q5T655 872 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 FBXW10Q5XX13 1052 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 KCNK18Q7Z418 384 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 IFT20Q8IY31 132 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 STK17AQ9UEE5 414 aa12.06□□□□□ -0.48
SNIP1-204ENST00000638725 ZEB2O60315 1214 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 KLRC1P26715 233 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 INPP5BP32019 993 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 PAK2Q13177 524 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 GRIK5Q16478 980 aa12.05□□□□□ -0.48
SNIP1-204ENST00000638725 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms