RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 MFSD5Q6N075 450 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 GPR153Q6NV75 609 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 APOA5Q6Q788 366 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 FANCBQ8NB91 859 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 IL31RAQ8NI17 732 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 AFG1LQ8WV93 481 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 TRPV6Q9H1D0 765 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 FAM47CQ5HY64 1035 aa19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 TMTC3Q6ZXV5 915 aa19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 VSIG10LQ86VR7 867 aa19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 CUL5Q93034 780 aa19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 RNPC3Q96LT9 517 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 ALDH8A1Q9H2A2 487 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 HIPK3Q9H422 1215 aa19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 DDX41Q9UJV9 622 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-259ENST00000638114 SCN10AQ9Y5Y9 1956 aa19.33■□□□□ 0.69
CACNA1A-259ENST00000638114 hCG_1642624A0A1W2PR95 340 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 MMP3P08254 477 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 HMGB1P09429 215 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 CYP2C18P33260 490 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 CHMP4BP1P59074 171 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 PPIGQ13427 754 aaKnown RBP eCLIP19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 NBPF20Q3BBV1 942 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 TMEM199Q8N511 208 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 DEFB123Q8N688 67 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 SMARCC2Q8TAQ2 1214 aa19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 ZFP91Q96JP5 570 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-259ENST00000638114 ZBTB43O43298 467 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 RGS20O76081 388 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 REC8O95072 547 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 CSF2RAP15509 400 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 FGD1P98174 961 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 USP17L6PQ6QN14 398 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 Q7L0L9 218 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 DHX37Q8IY37 1157 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 PPP1R13LQ8WUF5 828 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 TRMT13Q9NUP7 481 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 BRPF3Q9ULD4 1205 aa19.32■□□□□ 0.68
CACNA1A-259ENST00000638114 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 SUPT20HL2P0C7V6 817 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 HSPA4P34932 840 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 LAMC2Q13753 1193 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 RTN1Q16799 776 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 KCNV1Q6PIU1 500 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 EMID1Q96A84 441 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 JAKMIP1Q96N16 626 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 NOC4LQ9BVI4 516 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 NAP1L2Q9ULW6 460 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
CACNA1A-259ENST00000638114 FRMPD4Q14CM0 1322 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 LAMA2P24043 3122 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 MYH7BA7E2Y1 1941 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 SORBS3O60504 671 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 CYP2C9P11712 490 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 CPA1P15085 419 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 CASTP20810 708 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 DGKDQ16760 1214 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 NFRKBQ6P4R8 1299 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 HEATR3Q7Z4Q2 680 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 KCNB2Q92953 911 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 PPP4R2Q9NY27 417 aa19.3■□□□□ 0.68
CACNA1A-259ENST00000638114 CNTNAP5Q8WYK1 1306 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 MEIS2O14770 477 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 GGPS1O95749 300 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 CCL23P55773 120 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 GNPTABQ3T906 1256 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 BLOC1S2Q6QNY1 142 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 PPTC7Q8NI37 304 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 GPKOWQ92917 476 aaPredicted RBP eCLIP19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 PSTPIP2Q9H939 334 aa19.29■□□□□ 0.68
CACNA1A-259ENST00000638114 STAM2O75886 525 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 ACRP10323 421 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 TGFB3P10600 412 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 UBA1P22314 1058 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 MRPS9P82933 396 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 PTPN11Q06124 597 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 CELF3Q5SZQ8 465 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 PSRC1Q6PGN9 363 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 IL23AQ9NPF7 189 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 RTEL1Q9NZ71 1219 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 NOD1Q9Y239 953 aa19.28■□□□□ 0.68
CACNA1A-259ENST00000638114 ZNF286BP0CG31 522 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 SMAD3P84022 425 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 SP2Q02086 613 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 UBE2SQ16763 222 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 TMEM240Q5SV17 173 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 MYSM1Q5VVJ2 828 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 Q6ZUG5 572 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 ZNF365Q70YC5 407 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 C16orf59Q7L2K0 433 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 KAT2BQ92831 832 aa19.27■□□□□ 0.68
CACNA1A-259ENST00000638114 INPP4AQ96PE3 977 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms