RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 NOP9Q86U38 636 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 LIG4P49917 911 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 MMS22LQ6ZRQ5 1243 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 FAM193BQ96PV7 902 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 PLIN2Q99541 437 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 CTTNBP2Q8WZ74 1663 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 CHUKO15111 745 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 SPARCL1Q14515 664 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 CAB39Q9Y376 341 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 MAGEA9P43362 315 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 LRMPQ12912 555 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 CNGA3Q16281 694 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 TPTE2Q6XPS3 522 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 MYOCDQ8IZQ8 938 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 ANKRD44Q8N8A2 993 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 BEGAINQ9BUH8 593 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 TRPV6Q9H1D0 765 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 OLFML3Q9NRN5 406 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 MBIPQ9NS73 344 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 IRX1P78414 480 aaPredicted RBP20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 POLKQ9UBT6 870 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 KIRREL3Q8IZU9 778 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 APOBEC2Q9Y235 224 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 DTNBO60941 627 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 SLC1A4P43007 532 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 PSMC1P62191 440 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 MCUQ8NE86 351 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 CBX8Q9HC52 389 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 RBM6P78332 1123 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 MECOMQ03112 1051 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 MYSM1Q5VVJ2 828 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 TAGAPQ8N103 731 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 MT-ND3P03897 115 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 PTPN22Q9Y2R2 807 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 SPOPLQ6IQ16 392 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 TNNQ9UQP3 1299 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 PHLPP2Q6ZVD8 1323 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 CNBD2Q96M20 576 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 MMS19Q96T76 1030 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 BCL2L12Q9HB09 334 aa20.85■□□□□ 0.93
CACNA1A-257ENST00000638009 PGRMC1O00264 195 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 TOM1L1O75674 476 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 RPN1P04843 607 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 BASP1P80723 227 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 RUNX1T1Q06455 604 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 EIF2S1P05198 315 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 MORC3Q14149 939 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 ADCK1Q86TW2 530 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 SERPINB1P30740 379 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 ADCY3O60266 1144 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 GNL1P36915 607 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 NUP62P37198 522 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 MAGOHBQ96A72 148 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 ZBTB9Q96C00 473 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 NLRP4Q96MN2 994 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 FMNL1O95466 1100 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 ABCF3Q9NUQ8 709 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 PKD2L2Q9NZM6 624 aa20.84■□□□□ 0.93
CACNA1A-257ENST00000638009 ARL13BQ3SXY8 428 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 SUGT1Q9Y2Z0 365 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 SGO2Q562F6 1265 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 TADA2BQ86TJ2 420 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 CDR2LQ86X02 465 aaPredicted RBP20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 PDE4DIPQ5VU43 2346 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 KRT37O76014 449 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 SLC4A1P02730 911 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 MAGEB5Q9BZ81 275 aa20.83■□□□□ 0.93
CACNA1A-257ENST00000638009 PIK3AP1Q6ZUJ8 805 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 CFAP73A6NFT4 308 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 C16orf96A6NNT2 1141 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 CENPUQ71F23 418 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 RRM2BQ7LG56 351 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 TLK2Q86UE8 772 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 ZNF555Q8NEP9 628 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 MAPK8IP1Q9UQF2 711 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 KLHL31Q9H511 634 aa20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 PAPOLBQ9NRJ5 636 aaKnown RBP20.83■□□□□ 0.92
CACNA1A-257ENST00000638009 ZBED4O75132 1171 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 E2F5Q15329 346 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 METTL13Q8N6R0 699 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 FAM178BQ8IXR5 827 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 DYDC2Q96IM9 177 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 ECEL1O95672 775 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 ABL1P00519 1130 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 PAPOLAP51003 745 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 RSRC2Q7L4I2 434 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 PLD3Q8IV08 490 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 ANO3Q9BYT9 981 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 SYBUQ9NX95 663 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 ICE1Q9Y2F5 2266 aa20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 TLR3O15455 904 aaKnown RBP20.82■□□□□ 0.92
CACNA1A-257ENST00000638009 CDC25BP30305 580 aa20.81■□□□□ 0.92
CACNA1A-257ENST00000638009 CAV1Q03135 178 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms