RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 IL31RAQ8NI17 732 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 POLR3EQ9NVU0 708 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 COLQQ9Y215 455 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-249ENST00000637777 MYH7BA7E2Y1 1941 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 ELP1O95163 1332 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 CABYRO75952 493 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 ARIH2O95376 493 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 ADCY7P51828 1080 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 CCSAPQ6IQ19 270 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 CPLX2Q6PUV4 134 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 PHKBQ93100 1093 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 SLC26A6Q9BXS9 759 aa16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-249ENST00000637777 hCG_1984214I3L0E3 225 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 CTAGE5O15320 804 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 TLR3O15455 904 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 CLTBP09497 229 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 MAGEA10P43363 369 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 ANAPC15P60006 121 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 TOB2Q14106 344 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 SNX17Q15036 470 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 FAM47CQ5HY64 1035 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 TRIM22Q8IYM9 498 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 ZNF713Q8N859 430 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 FAM217BQ9NTX9 383 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 TMEM39AQ9NV64 488 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
CACNA1A-249ENST00000637777 SMCO2A6NFE2 343 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 STXBP3O00186 592 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 ARVCFO00192 962 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 MEIS2O14770 477 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 SCG2P13521 617 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 PDIA3P30101 505 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 PSMC6P62333 389 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 C1orf53Q5VUE5 145 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 KCNV1Q6PIU1 500 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 VSIG10LQ86VR7 867 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 AFG1LQ8WV93 481 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 BARHL2Q9NY43 387 aa16.53■□□□□ 0.24
CACNA1A-249ENST00000637777 STAM2O75886 525 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 RAG1P15918 1043 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 FUT2Q10981 343 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 ITGA7Q13683 1181 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 CCDC62Q6P9F0 684 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 MTG1Q9BT17 334 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 GLT8D2Q9H1C3 349 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 SLKQ9H2G2 1235 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 PDLIM7Q9NR12 457 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
CACNA1A-249ENST00000637777 TRIOBPQ9H2D6 2365 aa16.52■□□□□ 0.23
CACNA1A-249ENST00000637777 NID2Q14112 1375 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 NOP56O00567 594 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 KPNA6O60684 536 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 SEC24BO95487 1268 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 GGPS1O95749 300 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 NKX3-2P78367 333 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 ARHGAP1Q07960 439 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 SSRP1Q08945 709 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 LAMC2Q13753 1193 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 ANKRD1Q15327 319 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 NLRX1Q86UT6 975 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 SPATA33Q96N06 139 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
CACNA1A-249ENST00000637777 FRMPD4Q14CM0 1322 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 MMP3P08254 477 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 SP4Q02446 784 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 DGKDQ16760 1214 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 PCNX4Q63HM2 1172 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 RNF26Q9BY78 433 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 C6orf50Q9HD87 102 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 NOD1Q9Y239 953 aa16.5■□□□□ 0.23
CACNA1A-249ENST00000637777 A6NJR5 290 aa16.49■□□□□ 0.23
CACNA1A-249ENST00000637777 FIBPO43427 364 aa16.49■□□□□ 0.23
CACNA1A-249ENST00000637777 CDKL5O76039 1030 aa16.49■□□□□ 0.23
CACNA1A-249ENST00000637777 TGFB3P10600 412 aa16.49■□□□□ 0.23
CACNA1A-249ENST00000637777 IFNAR1P17181 557 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms