RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 PSMA7O14818 248 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 MYO1BO43795 1136 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 MED24O75448 989 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 FILIP1LQ4L180 1135 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 TTI2Q6NXR4 508 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 PPFIBP1Q86W92 1011 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 ZNF710Q8N1W2 664 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 ZNF341Q9BYN7 854 aa17.16■□□□□ 0.34
SCN8A-214ENST00000637709 CENPFP49454 3210 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 AKR1B15C9JRZ8 316 aaPredicted RBP17.15■□□□□ 0.34
SCN8A-214ENST00000637709 CHMP2AO43633 222 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 PBX1P40424 430 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 TERF1P54274 439 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 KCNB1Q14721 858 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 FEZ1Q99689 392 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 SEMA6BQ9H3T3 888 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 HOMER2Q9NSB8 354 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 DNAI1Q9UI46 699 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 NRDCO43847 1150 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 PKD2L1Q9P0L9 805 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 PPP2R2CQ9Y2T4 447 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
SCN8A-214ENST00000637709 CAP2P40123 477 aa17.14■□□□□ 0.34
SCN8A-214ENST00000637709 STIM1Q13586 685 aa17.14■□□□□ 0.34
SCN8A-214ENST00000637709 RAD9BQ6WBX8 426 aa17.14■□□□□ 0.34
SCN8A-214ENST00000637709 REXO1L1PQ8IX06 675 aa17.14■□□□□ 0.34
SCN8A-214ENST00000637709 LIMA1Q9UHB6 759 aaKnown RBP17.14■□□□□ 0.34
SCN8A-214ENST00000637709 ABL1P00519 1130 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 ZNF76P36508 570 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 CPXCR1Q8N123 301 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 P2RX5Q93086 422 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 LENG9Q96B70 501 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 CTAGE1Q96RT6 745 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 LZTFL1Q9NQ48 299 aa17.14■□□□□ 0.33
SCN8A-214ENST00000637709 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 INPP5BP32019 993 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 PDIA5Q14554 519 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 NELFCDQ8IXH7 590 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 MICALL2Q8IY33 904 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 MRPL44Q9H9J2 332 aaKnown RBP17.13■□□□□ 0.33
SCN8A-214ENST00000637709 GOPCQ9HD26 462 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 ZBTB39O15060 712 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 AMPD3Q01432 767 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 PABPC4Q13310 644 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCN8A-214ENST00000637709 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 TRMT1LQ7Z2T5 733 aaKnown RBP17.13■□□□□ 0.33
SCN8A-214ENST00000637709 CNOT6LQ96LI5 555 aaKnown RBP17.13■□□□□ 0.33
SCN8A-214ENST00000637709 RGL1Q9NZL6 768 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
SCN8A-214ENST00000637709 H7C1D1 291 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 ARHGAP6O43182 974 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 MFAP3LO75121 409 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 TMEM119Q4V9L6 283 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 AGBL3Q8NEM8 1001 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
SCN8A-214ENST00000637709 TFR2Q9UP52 801 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 MSH4O15457 936 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
SCN8A-214ENST00000637709 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 ACRBPQ8NEB7 543 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 CRYGNQ8WXF5 182 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 TUBGCP2Q9BSJ2 902 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 ATAD5Q96QE3 1844 aa17.12■□□□□ 0.33
SCN8A-214ENST00000637709 POLD1P28340 1107 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
SCN8A-214ENST00000637709 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 WDR24Q96S15 920 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 KIF13BQ9NQT8 1826 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 DDX39AO00148 427 aaKnown RBP17.11■□□□□ 0.33
SCN8A-214ENST00000637709 EML1O00423 815 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 PLA2G4BP0C869 781 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 CCNE1P24864 410 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 MTIF2P46199 727 aaKnown RBP17.11■□□□□ 0.33
SCN8A-214ENST00000637709 USP11P51784 963 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 SPIRE1Q08AE8 756 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 PRKG1Q13976 671 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
SCN8A-214ENST00000637709 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 TRIM65Q6PJ69 517 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 UNC13DQ70J99 1090 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 GPBP1Q86WP2 473 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 CHP1Q99653 195 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 WDR18Q9BV38 432 aa17.11■□□□□ 0.33
SCN8A-214ENST00000637709 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
SCN8A-214ENST00000637709 STK17AQ9UEE5 414 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms