RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 EEF2KMTQ96G04 330 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 CENPHQ9H3R5 247 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 PDE8AO60658 829 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 KLHDC7AQ5VTJ3 777 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 MAATS1Q7Z4T9 603 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 PDE4DQ08499 809 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 SNCBQ16143 134 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 CYFIP2Q96F07 1278 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 ODF2LQ9ULJ1 636 aa17.2■□□□□ 0.34
CACNA1A-235ENST00000637004 APBA3O96018 575 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 LRIG3Q6UXM1 1119 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 EGFL6Q8IUX8 553 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 BLIDQ8IZY5 108 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 ESYT3A0FGR9 886 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 CYP7A1P22680 504 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 HSPA9P38646 679 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 EIF1ADQ8N9N8 165 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 MAGEC3Q8TD91 643 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 MS4A14Q96JA4 679 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 LUC7LQ9NQ29 371 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 FAM207AQ9NSI2 230 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 SIK3Q9Y2K2 1263 aa17.19■□□□□ 0.34
CACNA1A-235ENST00000637004 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 GMNCA6NCL1 334 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 SSU72P8A0A1W2PR75 194 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 MYZAPP0CAP1 466 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 RRAGAQ7L523 313 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 PARP9Q8IXQ6 854 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 NDST4Q9H3R1 872 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 PPANQ9NQ55 473 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 PLAAQ9Y263 795 aa17.18■□□□□ 0.34
CACNA1A-235ENST00000637004 MAGEB6P1A0A0J9YX57 407 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 RASSF7Q02833 373 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 TAX1BP1Q86VP1 789 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 ANKRD13CQ8N6S4 541 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 CASKIN2Q8WXE0 1202 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 N4BP2L2Q92802 583 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 PLCB1Q9NQ66 1216 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 SALL4Q9UJQ4 1053 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 LRRC53A6NM62 1247 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 LAD1O00515 517 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 FGFR1OPO95684 399 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 EZRP15311 586 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 HPDP32754 393 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 TNNC1P63316 161 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 COBLL1Q53SF7 1204 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 CNNM4Q6P4Q7 775 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 CYB5D1Q6P9G0 228 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 SMIM5Q71RC9 77 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 SGSM3Q96HU1 749 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 EDEM3Q9BZQ6 932 aa17.17■□□□□ 0.34
CACNA1A-235ENST00000637004 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 ZSCAN5CA6NGD5 496 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 ASIC1P78348 528 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 STK4Q13043 487 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 P3H4Q92791 437 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 KRT12Q99456 494 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 PLIN2Q99541 437 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 SH3GLB2Q9NR46 395 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 ABCB11O95342 1321 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 BCORQ6W2J9 1755 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 BUB1O43683 1085 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 AMPD3Q01432 767 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 IFFO1Q0D2I5 559 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 BIRC3Q13489 604 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 MAN2A1Q16706 1144 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 RUFY4Q6ZNE9 571 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 PCDHA4Q9UN74 947 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 EPHB6O15197 1021 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 HLFQ16534 295 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 ASTE1Q2TB18 679 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 CEP57Q86XR8 500 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 FUKQ8N0W3 1084 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 MIEF2Q96C03 454 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms