RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 USP17L17D6RBQ6 530 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 USP17L19D6RCP7 530 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 USP17L20D6RJB6 530 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 USP17L24Q0WX57 530 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 STRN3Q13033 797 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 TRIM14Q14142 442 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 MORC3Q14149 939 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 KCNJ12Q14500 433 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 SMC1AQ14683 1233 aaKnown RBP8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 ADGRA1Q86SQ6 560 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 GPBP1Q86WP2 473 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 VSTM4Q8IW00 320 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 ZNF280CQ8ND82 737 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 NEK11Q8NG66 645 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 IWS1Q96ST2 819 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 MRIQ9BWK5 157 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 FHDC1Q9C0D6 1143 aaPredicted RBP8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 EHD4Q9H223 541 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 VCPKMTQ9H867 229 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 LRRC37A3O60309 1634 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 KCPQ6ZWJ8 1503 aa8.5□□□□□ -1.05
CACNA1D-220ENST00000636999 FOXN1O15353 648 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 EPB41P11171 864 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 CCND2P30279 289 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 HOXA13P31271 388 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 HMGCS2P54868 508 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SNAP25P60880 206 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RAD51AP2Q09MP3 1159 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 MAEAQ7L5Y9 396 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 PROM2Q8N271 834 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SRBD1Q8N5C6 995 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 JAKMIP2Q96AA8 810 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 LARSQ9P2J5 1176 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SRPRBQ9Y5M8 271 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RGPD5Q99666 1765 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 FDPSP14324 419 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SNRNP48Q6IEG0 339 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 ATP6V0A1Q93050 837 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 FUCA2Q9BTY2 467 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 MRPL44Q9H9J2 332 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RAVER2Q9HCJ3 691 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 CALUO43852 315 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 DMTNQ08495 405 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 COG2Q14746 738 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 XKR9Q5GH70 373 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 NRBP2Q9NSY0 501 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RNF146Q9NTX7 359 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SOWAHDA6NJG2 315 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SMARCA1P28370 1054 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RNASE9P60153 205 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RBL2Q08999 1139 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 IFFO1Q0D2I5 559 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 MTMR2Q13614 643 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 FAM160B1Q5W0V3 765 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 SHC4Q6S5L8 630 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 OR8K1Q8NGG5 319 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 ENOX1Q8TC92 643 aaKnown RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 HINFPQ9BQA5 517 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 CCDC113Q9H0I3 377 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 RPAP3Q9H6T3 665 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 PCDHA6Q9UN73 950 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 PCDHA8Q9Y5H6 950 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 COL4A3BPQ9Y5P4 624 aa8.49□□□□□ -1.05
CACNA1D-220ENST00000636999 HSF2BPO75031 334 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 GCNT3O95395 438 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 PDHBP11177 359 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 ERCC5P28715 1186 aaPredicted RBP8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 COPB2P35606 906 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 CLCN6P51797 869 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 TUBB4BP68371 445 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 ORC2Q13416 577 aaPredicted RBP8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 COL9A3Q14050 684 aaPredicted RBP8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 RESP18Q5W5W9 173 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 USP17L6PQ6QN14 398 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 ANKRD13AQ8IZ07 590 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 GPC2Q8N158 579 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 OXER1Q8TDS5 423 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 IFT81Q8WYA0 676 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 RMDN3Q96TC7 470 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 KIAA1024Q9UPX6 916 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 PCDHB13Q9Y5F0 798 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 RGPD1P0DJD0 1748 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 NHSL1Q5SYE7 1610 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 SLFN14P0C7P3 912 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 STAT3P40763 770 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 CETN2P41208 172 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 NBPF9Q3BBW0 867 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 RNF187Q5TA31 235 aaPredicted RBP8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 FKBP1CQ5VVH2 108 aa8.48□□□□□ -1.05
CACNA1D-220ENST00000636999 PRAMEF18Q5VWM3 479 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms