RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 USP17L17D6RBQ6 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L19D6RCP7 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L20D6RJB6 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 CACNB3P54284 484 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L24Q0WX57 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 KCTD16Q68DU8 428 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L6PQ6QN14 398 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 SLC30A10Q6XR72 485 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 IFT81Q8WYA0 676 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 EIF3CQ99613 913 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 RRP15Q9Y3B9 282 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 TUBB2AQ13885 445 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 FAM196AQ6ZSG2 479 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 C7orf25Q9BPX7 421 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 TUBB2BQ9BVA1 445 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 PHLPP1O60346 1717 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 USO1O60763 962 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 TACC1O75410 805 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 STAT3P40763 770 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 POLR2FP61218 127 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 FAM114A1Q8IWE2 563 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 FAM71BQ8TC56 605 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 PDHBP11177 359 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 KRT79Q5XKE5 535 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 LRRC31Q6UY01 552 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 CREG2Q8IUH2 290 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 AFAP1L1Q8TED9 768 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 BCAS3Q9H6U6 928 aa15.56■□□□□ 0.08
CACNA1A-228ENST00000636610 MEIS1O00470 390 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 EDIL3O43854 480 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 ADCY7P51828 1080 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 TRADDQ15628 312 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 WDR93Q6P2C0 686 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 NUP58Q9BVL2 599 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 LDHCP07864 332 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 GSTO1P78417 241 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 GRAPQ13588 217 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 CCNI2Q6ZMN8 369 aaPredicted RBP15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 SPATA4Q8NEY3 305 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 NEDD1Q8NHV4 660 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 GRAPLQ8TC17 118 aaPredicted RBP15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 OSBPL9Q96SU4 736 aa15.55■□□□□ 0.08
CACNA1A-228ENST00000636610 PRPHP41219 470 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 TCP10Q12799 353 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 RAPGEF1Q13905 1077 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 TMEM266Q2M3C6 531 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 DAGLBQ8NCG7 672 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 EHBP1Q8NDI1 1231 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 AK8Q96MA6 479 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 PACSIN1Q9BY11 444 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 ACBD3Q9H3P7 528 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 RBM12Q9NTZ6 932 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 CWC15Q9P013 229 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 SNX12Q9UMY4 172 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 PLAGL2Q9UPG8 496 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 KIAA1024Q9UPX6 916 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 SIK3Q9Y2K2 1263 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 GOLGA6BA6NDN3 693 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L10C9JJH3 530 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 KRT18P05783 430 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 GUCY2FP51841 1108 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 CKAP4Q07065 602 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 POTECB2RU33 542 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 PPP1R11O60927 126 aaPredicted RBP15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 ACTN1P12814 892 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 DOK7Q18PE1 504 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 C16orf86Q6ZW13 317 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 CCDC170Q8IYT3 715 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 SH2D3CQ8N5H7 860 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 LSM14BQ9BX40 385 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 ADAMTS1Q9UHI8 967 aa15.54■□□□□ 0.08
CACNA1A-228ENST00000636610 AGPSO00116 658 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 TULP2O00295 520 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 LAD1O00515 517 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 ATP1A2P50993 1020 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 MAP9Q49MG5 647 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 HERC4Q5GLZ8 1057 aaPredicted RBP15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 FAM133AQ8N9E0 248 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 NOC3LQ8WTT2 800 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 ERGIC2Q96RQ1 377 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 DDX4Q9NQI0 724 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 POLLQ9UGP5 575 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 THRAP3Q9Y2W1 955 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 RHBDL3P58872 404 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 MAN2A1Q16706 1144 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 GALNT17Q6IS24 598 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 UNC13DQ70J99 1090 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 ADGRF4Q8IZF3 695 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 TRIM58Q8NG06 486 aa15.53■□□□□ 0.08
CACNA1A-228ENST00000636610 TBC1D5Q92609 795 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms