RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SLC30A10Q6XR72 485 aa21.51■■□□□ 1.03
CLN6-212ENST00000636020 RASGRP2Q7LDG7 609 aa21.51■■□□□ 1.03
CLN6-212ENST00000636020 AFG1LQ8WV93 481 aa21.51■■□□□ 1.03
CLN6-212ENST00000636020 RANBP17Q9H2T7 1088 aaKnown RBP21.51■■□□□ 1.03
CLN6-212ENST00000636020 GTF2IRD1Q9UHL9 959 aa21.51■■□□□ 1.03
CLN6-212ENST00000636020 MICAL3Q7RTP6 2002 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 NCK2O43639 380 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 LGR5O75473 907 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 CALML3P27482 149 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 TDO2P48775 406 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 PKN1Q16512 942 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 CTC1Q2NKJ3 1217 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 ZNF618Q5T7W0 954 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 RPAINQ86UA6 219 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 CLEC4DQ8WXI8 215 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 PBXIP1Q96AQ6 731 aa21.5■■□□□ 1.03
CLN6-212ENST00000636020 TMEM221A6NGB7 291 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 M0R296 226 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 MBTPS2O43462 519 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 RAB11FIP3O75154 756 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 AMHP03971 560 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 MMP3P08254 477 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 PDE4BQ07343 736 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 PTK7Q13308 1070 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 CCDC62Q6P9F0 684 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 TRIM67Q6ZTA4 783 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 TMEM192Q8IY95 271 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 MYOCDQ8IZQ8 938 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 HDAC6Q9UBN7 1215 aa21.49■■□□□ 1.03
CLN6-212ENST00000636020 DBF4BQ8NFT6 615 aa21.48■■□□□ 1.03
CLN6-212ENST00000636020 DNERQ8NFT8 737 aa21.48■■□□□ 1.03
CLN6-212ENST00000636020 WNT8BQ93098 351 aa21.48■■□□□ 1.03
CLN6-212ENST00000636020 MPHOSPH6Q99547 160 aaKnown RBP21.48■■□□□ 1.03
CLN6-212ENST00000636020 ALG13Q9NP73 1137 aaKnown RBP21.48■■□□□ 1.03
CLN6-212ENST00000636020 GPAA1O43292 621 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 APPP05067 770 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 GNAT2P19087 354 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 CASTP20810 708 aaKnown RBP21.47■■□□□ 1.03
CLN6-212ENST00000636020 DLX2Q07687 328 aaPredicted RBP21.47■■□□□ 1.03
CLN6-212ENST00000636020 CLUL1Q15846 466 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 PPP4R3BQ5MIZ7 849 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 BTNL9Q6UXG8 535 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 RNF207Q6ZRF8 634 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 FBXO11Q86XK2 927 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 APPBP2Q92624 585 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 STX8Q9UNK0 236 aa21.47■■□□□ 1.03
CLN6-212ENST00000636020 SLC16A2P36021 539 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 RPS6P62753 249 aaKnown RBP21.46■■□□□ 1.03
CLN6-212ENST00000636020 ARHGAP1Q07960 439 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 TTBK2Q6IQ55 1244 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 SUGP1Q8IWZ8 645 aaKnown RBP21.46■■□□□ 1.03
CLN6-212ENST00000636020 IFNL3Q8IZI9 196 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 C7orf31Q8N865 590 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 IL17RBQ9NRM6 502 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 FAM86C1Q9NVL1 165 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 DCHS1Q96JQ0 3298 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 MYO15AQ9UKN7 3530 aa21.46■■□□□ 1.03
CLN6-212ENST00000636020 PATL2C9JE40 543 aaKnown RBP21.45■■□□□ 1.02
CLN6-212ENST00000636020 STXBP3O00186 592 aa21.45■■□□□ 1.02
CLN6-212ENST00000636020 GH1P01241 217 aa21.45■■□□□ 1.02
CLN6-212ENST00000636020 SMAD4Q13485 552 aaKnown RBP21.45■■□□□ 1.02
CLN6-212ENST00000636020 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
CLN6-212ENST00000636020 YME1L1Q96TA2 773 aa21.45■■□□□ 1.02
CLN6-212ENST00000636020 MTMR7Q9Y216 660 aa21.45■■□□□ 1.02
CLN6-212ENST00000636020 PSEN2P49810 448 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 HYAL1Q12794 435 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 LY6KQ17RY6 165 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 CCDC96Q2M329 555 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 PLEKHG4Q58EX7 1191 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 SYDE2Q5VT97 1194 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 FBXL6Q8N531 539 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 KBTBD3Q8NAB2 608 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 DCAF4Q8WV16 495 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 TOP1MTQ969P6 601 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 EMSYQ7Z589 1322 aa21.44■■□□□ 1.02
CLN6-212ENST00000636020 B4DLN1 442 aa21.43■■□□□ 1.02
CLN6-212ENST00000636020 NMT2O60551 498 aa21.43■■□□□ 1.02
CLN6-212ENST00000636020 HMMRO75330 724 aa21.43■■□□□ 1.02
CLN6-212ENST00000636020 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
CLN6-212ENST00000636020 MRPL12P52815 198 aaKnown RBP21.43■■□□□ 1.02
CLN6-212ENST00000636020 ZNF200P98182 395 aaPredicted RBP21.43■■□□□ 1.02
CLN6-212ENST00000636020 DGKDQ16760 1214 aa21.43■■□□□ 1.02
CLN6-212ENST00000636020 ALG1Q9BT22 464 aa21.43■■□□□ 1.02
CLN6-212ENST00000636020 M0R2C6 588 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 HAS3O00219 553 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 RNF113AO15541 343 aaKnown RBP21.42■■□□□ 1.02
CLN6-212ENST00000636020 NOVP48745 357 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 ZXDAP98168 799 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 COL4A6Q14031 1691 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 CHST3Q7LGC8 479 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 NLRC5Q86WI3 1866 aa21.42■■□□□ 1.02
CLN6-212ENST00000636020 KMT2EQ8IZD2 1858 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 VPS13AQ96RL7 3174 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 RSPH10B2B2RC85 870 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 TBX10O75333 385 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 RSPH10BP0C881 870 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 PPARAQ07869 468 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 MFSD10Q14728 455 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 KIAA0753Q2KHM9 967 aa21.41■■□□□ 1.02
CLN6-212ENST00000636020 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms