RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GOLGA6L10A0A0M3HER8 536 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 GOLGA6L10A6NI86 522 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ECE2O60344 883 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 RPS12P25398 132 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 EIF6P56537 245 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 E2F4Q16254 413 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 GPBP1Q86WP2 473 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ANKRD7Q92527 254 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 LPAR1Q92633 364 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 NMT2O60551 498 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 SNHG28P0DPA3 235 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ADKP55263 362 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 E4F1Q66K89 784 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 STAG2Q8N3U4 1231 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 JADE2Q9NQC1 790 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 NDUFA10O95299 355 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 VAV2P52735 878 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 MYBPC2Q14324 1141 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 CDC42EP5Q6NZY7 148 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF662Q6ZS27 426 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 PDXKO00764 312 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 SLC16A3O15427 465 aaKnown RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 SLC4A8Q2Y0W8 1093 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TCERG1LQ5VWI1 586 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 EXOC8Q8IYI6 725 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TC2NQ8N9U0 490 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TMX1Q9H3N1 280 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TBC1D22BQ9NU19 505 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 PRDM4Q9UKN5 801 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 COL16A1Q07092 1604 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 LTBP4Q8N2S1 1624 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 F5H6K3 240 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 KLRC3Q07444 240 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC174Q6PII3 467 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ADGRF4Q8IZF3 695 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 SYCP3Q8IZU3 236 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TSPYL1Q9H0U9 437 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 JMJD4Q9H9V9 463 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 CEP72Q9P209 647 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 GUCA1BQ9UMX6 200 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 JRKLQ9Y4A0 524 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 HYOU1Q9Y4L1 999 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ARHGEF35A5YM69 484 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 AP5Z1O43299 807 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 OPA1O60313 960 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 GAS7O60861 476 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 DOK7Q18PE1 504 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TXNRD3Q86VQ6 643 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 CARD6Q9BX69 1037 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 IL17RBQ9NRM6 502 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 POLLQ9UGP5 575 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 BCRP11274 1271 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 NOVP48745 357 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 QRICH1Q2TAL8 776 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 GLE1Q53GS7 698 aaKnown RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 GBP6Q6ZN66 633 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 C17orf53Q8N3J3 647 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 MKNK1Q9BUB5 465 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 TAOK3Q9H2K8 898 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 EMILIN3Q9NT22 766 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 FRMPD2Q68DX3 1309 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 STRCP1A6NGW2 1772 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 PRR29P0C7W0 189 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 PLA2G4BP0C869 781 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 FERP16591 822 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ADAM9Q13443 819 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ASIC2Q16515 512 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 GNPTABQ3T906 1256 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 NCAPH2Q6IBW4 605 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 RASGRP4Q8TDF6 673 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 POLR3CQ9BUI4 534 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 HSPA1LP34931 641 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 PRCPP42785 496 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ARHGAP4P98171 946 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 EPHA7Q15375 998 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 Q4G0T1 1027 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 OTUD6AQ7L8S5 288 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 IFIH1Q9BYX4 1025 aaKnown RBP5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ODF2LQ9ULJ1 636 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 KIAA1024Q9UPX6 916 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 RGPD5Q99666 1765 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 NDC80O14777 642 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 KCNQ4P56696 695 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 GABPAQ06546 454 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 PRR16Q569H4 304 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 HSP90AA4PQ58FG1 418 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 ARFGAP2Q8N6H7 521 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 RDM1Q8NG50 284 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 RIT2Q99578 217 aa5.03□□□□□ -1.6
SCN1A-210ENST00000635776 MAFGO15525 162 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 PLA2G6O60733 806 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 KLRK1P26718 216 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 GBP1P32455 592 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CFAP221Q4G0U5 840 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 SMYD5Q6GMV2 418 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 FAM83AQ86UY5 434 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 MED4Q9NPJ6 270 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CALCOCO1Q9P1Z2 691 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DIS3Q9Y2L1 958 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 EYA4O95677 639 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms