RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 KRT31Q15323 416 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 RPS6KA2Q15349 733 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 HADHQ16836 314 aaKnown RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 ZDHHC9Q9Y397 364 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 TOM1O60784 492 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 IFNAR1P17181 557 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 KIF11P52732 1056 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 MYO1EQ12965 1108 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 PIP4K2CQ8TBX8 421 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 DACT3Q96B18 629 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 GGCXP38435 758 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 ZNF449Q6P9G9 518 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 FAM133AQ8N9E0 248 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 LRGUKQ96M69 825 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 HAUS8Q9BT25 410 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 BTG4Q9NY30 223 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 AFPP02771 609 aaKnown RBP12.67□□□□□ -0.38
COL11A1-211ENST00000635193 CCNE1P24864 410 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 YWHAEP62258 255 aaKnown RBP12.67□□□□□ -0.38
COL11A1-211ENST00000635193 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-211ENST00000635193 RASGRP4Q8TDF6 673 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 ELAC2Q9BQ52 826 aaKnown RBP12.67□□□□□ -0.38
COL11A1-211ENST00000635193 NFU1Q9UMS0 254 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 PDE8BO95263 885 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 FKBP3Q00688 224 aaKnown RBP12.67□□□□□ -0.38
COL11A1-211ENST00000635193 LRRC41Q15345 812 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 FAM102BQ5T8I3 360 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 KAZNQ674X7 775 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 SDCCAG3Q96C92 435 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 GOLPH3LQ9H4A5 285 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 STAM2O75886 525 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 PDHA1P08559 390 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 SLCO1A2P46721 670 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 SLC12A2P55011 1212 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 MYL7Q01449 175 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 SMCR8Q8TEV9 937 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-211ENST00000635193 AIFM3Q96NN9 605 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 IFT122Q9HBG6 1241 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 ANLNQ9NQW6 1124 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 KLC4Q9NSK0 619 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
COL11A1-211ENST00000635193 TMEM232C9JQI7 657 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 SERPING1P05155 500 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 MSH2P43246 934 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 KRT81Q14533 505 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 KCNG1Q9UIX4 513 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 RASGRF2O14827 1237 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 ECEL1O95672 775 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 ADD2P35612 726 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 LMNB2Q03252 620 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 TCP10Q12799 353 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 PROCA1Q8NCQ7 364 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-211ENST00000635193 TBC1D22AQ8WUA7 517 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 EPS15L1Q9UBC2 864 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 INTUQ9ULD6 942 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 TRIM66O15016 1216 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 SEMA3EO15041 775 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
COL11A1-211ENST00000635193 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
COL11A1-211ENST00000635193 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 ST7Q9NRC1 585 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 CHGBP05060 677 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 KRT3P12035 628 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-211ENST00000635193 CDC25AP30304 524 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 CUL1Q13616 776 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 C10orf76Q5T2E6 689 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 OTUD6AQ7L8S5 288 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 TRIM42Q8IWZ5 723 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
COL11A1-211ENST00000635193 TAB3Q8N5C8 712 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-211ENST00000635193 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 GREM2Q9H772 168 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 PLAAQ9Y263 795 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 AFG3L2Q9Y4W6 797 aa12.66□□□□□ -0.38
COL11A1-211ENST00000635193 H0Y3Z8 333 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 MAPK13O15264 365 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 TTC4O95801 387 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
COL11A1-211ENST00000635193 TMED2Q15363 201 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 MMEL1Q495T6 779 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-211ENST00000635193 NUGGCQ68CJ6 796 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 GDAP1Q8TB36 358 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 FMO2Q99518 471 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms