RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 GUCA1BQ9UMX6 200 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 FRMPD2Q68DX3 1309 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 BRWD3Q6RI45 1802 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 EIF3CLB5ME19 914 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 PPEF1O14829 653 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 SLC26A4O43511 780 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 KRT86O43790 486 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 FCER1AP12319 257 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 AKR1B1P15121 316 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GCFC2P16383 781 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 HERVK_113P62684 666 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GTF2IP78347 998 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 LRRC63Q05C16 580 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 PSMD2Q13200 908 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 SEPT2Q15019 361 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 LONRF2Q1L5Z9 754 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 CCDC122Q5T0U0 273 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GPATCH4Q5T3I0 446 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 PPP4R3AQ6IN85 833 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 WDR59Q6PJI9 974 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 TRAPPC11Q7Z392 1133 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GUF1Q8N442 669 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 MSL3Q8N5Y2 521 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 KIAA0895Q8NCT3 520 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 LARP4BQ92615 738 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 RAD54LQ92698 747 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 CUL5Q93034 780 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 JAKMIP2Q96AA8 810 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 PCMTD1Q96MG8 357 aaPredicted RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 PNMA5Q96PV4 448 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 EIF3CQ99613 913 aaKnown RBP8.99□□□□□ -0.97
GPC3-204ENST00000631057 FUT8Q9BYC5 575 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 TSGA10Q9BZW7 698 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 GLT8D2Q9H1C3 349 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ANKZF1Q9H8Y5 726 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ST7Q9NRC1 585 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 BLOC1S4Q9NUP1 217 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 SERPINB13Q9UIV8 391 aa8.99□□□□□ -0.97
GPC3-204ENST00000631057 ADAMTSL1Q8N6G6 1762 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 MYMKA6NI61 221 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 PLSCR1O15162 318 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 SASH3O75995 380 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 TNNI2P48788 182 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 MRPL12P52815 198 aaKnown RBP8.98□□□□□ -0.97
GPC3-204ENST00000631057 CKAP4Q07065 602 aaKnown RBP8.98□□□□□ -0.97
GPC3-204ENST00000631057 GPS2Q13227 327 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 PICALMQ13492 652 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 MCM6Q14566 821 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 SMC1AQ14683 1233 aaKnown RBP8.98□□□□□ -0.97
GPC3-204ENST00000631057 MAN2A1Q16706 1144 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 TMEM119Q4V9L6 283 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 MIIPQ5JXC2 388 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 TAF3Q5VWG9 929 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 HDXQ7Z353 690 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 CCDC84Q86UT8 332 aaPredicted RBP8.98□□□□□ -0.97
GPC3-204ENST00000631057 LRRC47Q8N1G4 583 aaKnown RBP8.98□□□□□ -0.97
GPC3-204ENST00000631057 FBXO22Q8NEZ5 403 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 SNX29Q8TEQ0 813 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 COA7Q96BR5 231 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 TSG101Q99816 390 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 GPCPD1Q9NPB8 672 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 NRXN2Q9P2S2 1712 aa8.98□□□□□ -0.97
GPC3-204ENST00000631057 SIPA1L1O43166 1804 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 KIF13BQ9NQT8 1826 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 ANO9A1A5B4 782 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 CCDC66A2RUB6 948 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
GPC3-204ENST00000631057 MAP2K7O14733 419 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 SLC37A4O43826 429 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 EIF3JO75822 258 aaKnown RBP8.97□□□□□ -0.97
GPC3-204ENST00000631057 TDP2O95551 362 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 ABL1P00519 1130 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 HLA-DOAP06340 250 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 MCM3P25205 808 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 OAS2P29728 719 aaKnown RBP8.97□□□□□ -0.97
GPC3-204ENST00000631057 HNRNPH3P31942 346 aaKnown RBP8.97□□□□□ -0.97
GPC3-204ENST00000631057 DDR1Q08345 913 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 SPA17Q15506 151 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 VWA3BQ502W6 1294 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 ADGRF4Q8IZF3 695 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 RPGRIP1Q96KN7 1286 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 NHEJ1Q9H9Q4 299 aaPredicted RBP8.97□□□□□ -0.97
GPC3-204ENST00000631057 JMJD4Q9H9V9 463 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 SLC39A2Q9NP94 309 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 AGPAT5Q9NUQ2 364 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 USP40Q9NVE5 1235 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 RGS17Q9UGC6 210 aaPredicted RBP8.97□□□□□ -0.97
GPC3-204ENST00000631057 ATP6V0A2Q9Y487 856 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 KDM3AQ9Y4C1 1321 aa8.97□□□□□ -0.97
GPC3-204ENST00000631057 RASSF10A6NK89 507 aa8.96□□□□□ -0.97
GPC3-204ENST00000631057 RIMBP2O15034 1052 aa8.96□□□□□ -0.97
GPC3-204ENST00000631057 ZBTB5O15062 677 aa8.96□□□□□ -0.97
GPC3-204ENST00000631057 MARCH6O60337 910 aa8.96□□□□□ -0.97
GPC3-204ENST00000631057 TRIM37O94972 964 aa8.96□□□□□ -0.97
GPC3-204ENST00000631057 SHMT1P34896 483 aa8.96□□□□□ -0.97
GPC3-204ENST00000631057 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms