RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ZFP91	Q96JP5	570 aa	Predicted RBP	29.71	■■■□□ 2.35
UBE3A-222	ENST00000630907	RNF208	Q9H0X6	261 aa		29.71	■■■□□ 2.35
UBE3A-222	ENST00000630907	FAM184B	Q9ULE4	1060 aa		29.71	■■■□□ 2.35
UBE3A-222	ENST00000630907	SEPT4	O43236	478 aa		29.7	■■■□□ 2.35
UBE3A-222	ENST00000630907	STAM2	O75886	525 aa		29.7	■■■□□ 2.35
UBE3A-222	ENST00000630907	MRPS9	P82933	396 aa	Known RBP	29.7	■■■□□ 2.35
UBE3A-222	ENST00000630907	LARP1B	Q659C4	914 aa	Known RBP	29.7	■■■□□ 2.35
UBE3A-222	ENST00000630907	ABHD8	Q96I13	439 aa		29.7	■■■□□ 2.35
UBE3A-222	ENST00000630907	PDGFC	Q9NRA1	345 aa		29.7	■■■□□ 2.35
UBE3A-222	ENST00000630907	CCDC194	A0A1B0GVG4	234 aa		29.69	■■■□□ 2.34
UBE3A-222	ENST00000630907	BTBD18	B2RXH4	712 aa		29.69	■■■□□ 2.34
UBE3A-222	ENST00000630907	ARHGAP4	P98171	946 aa		29.69	■■■□□ 2.34
UBE3A-222	ENST00000630907	CCDC144B	Q3MJ40	725 aa		29.69	■■■□□ 2.34
UBE3A-222	ENST00000630907	SEPT14	Q6ZU15	432 aa		29.69	■■■□□ 2.34
UBE3A-222	ENST00000630907	RTEL1	Q9NZ71	1219 aa		29.69	■■■□□ 2.34
UBE3A-222	ENST00000630907	RBM47	A0AV96	593 aa	Known RBP	29.68	■■■□□ 2.34
UBE3A-222	ENST00000630907		H3BQV1	296 aa		29.68	■■■□□ 2.34
UBE3A-222	ENST00000630907	AKR1A1	P14550	325 aa		29.68	■■■□□ 2.34
UBE3A-222	ENST00000630907	NR5A1	Q13285	461 aa		29.68	■■■□□ 2.34
UBE3A-222	ENST00000630907	NONO	Q15233	471 aa	Known RBP eCLIP	29.68	■■■□□ 2.34	4e-9	■■■□□ 18.9
UBE3A-222	ENST00000630907	IFFO2	Q5TF58	517 aa		29.68	■■■□□ 2.34
UBE3A-222	ENST00000630907	PAK6	Q9NQU5	681 aa	Predicted RBP	29.68	■■■□□ 2.34
UBE3A-222	ENST00000630907	PDC	P20941	246 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	ADCYAP1R1	P41586	468 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	IQSEC1	Q6DN90	963 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	TBCK	Q8TEA7	893 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	CRYGN	Q8WXF5	182 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	TNFRSF25	Q93038	417 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	DDX20	Q9UHI6	824 aa	Known RBP	29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	HTT	P42858	3142 aa		29.67	■■■□□ 2.34
UBE3A-222	ENST00000630907	LRRC37A2	A6NM11	1700 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	MSC	O60682	206 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	RGS20	O76081	388 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	CYP3A4	P08684	503 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	ZNF76	P36508	570 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	GNPTAB	Q3T906	1256 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	PIK3AP1	Q6ZUJ8	805 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	NLRX1	Q86UT6	975 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	SPRYD3	Q8NCJ5	442 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	SCFD2	Q8WU76	684 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	INPP4A	Q96PE3	977 aa	Predicted RBP	29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	TMEM106C	Q9BVX2	250 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	UBIAD1	Q9Y5Z9	338 aa		29.66	■■■□□ 2.34
UBE3A-222	ENST00000630907	TNFAIP2	Q03169	654 aa		29.65	■■■□□ 2.34
UBE3A-222	ENST00000630907	GNL2	Q13823	731 aa	Known RBP	29.65	■■■□□ 2.34
UBE3A-222	ENST00000630907	TTLL4	Q14679	1199 aa		29.65	■■■□□ 2.34
UBE3A-222	ENST00000630907	DEFB118	Q96PH6	123 aa		29.65	■■■□□ 2.34
UBE3A-222	ENST00000630907	WDR11	Q9BZH6	1224 aa		29.65	■■■□□ 2.34
UBE3A-222	ENST00000630907	FOXP1	Q9H334	677 aa	Predicted RBP	29.65	■■■□□ 2.34
UBE3A-222	ENST00000630907	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	29.64	■■■□□ 2.34
UBE3A-222	ENST00000630907	GJB1	P08034	283 aa		29.64	■■■□□ 2.34
UBE3A-222	ENST00000630907	USP11	P51784	963 aa		29.64	■■■□□ 2.34
UBE3A-222	ENST00000630907	MXRA8	Q9BRK3	442 aa		29.64	■■■□□ 2.34
UBE3A-222	ENST00000630907	MRVI1	Q9Y6F6	885 aa		29.64	■■■□□ 2.34
UBE3A-222	ENST00000630907	RARB	P10826	455 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	SMPD1	P17405	629 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	ITGB5	P18084	799 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	INF2	Q27J81	1249 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	CEP55	Q53EZ4	464 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	EARS2	Q5JPH6	523 aa	Known RBP	29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	ANO1	Q5XXA6	986 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	LHX8	Q68G74	356 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	KCNV1	Q6PIU1	500 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	JADE2	Q9NQC1	790 aa		29.63	■■■□□ 2.33
UBE3A-222	ENST00000630907	TXN	P10599	105 aa	Known RBP	29.62	■■■□□ 2.33
UBE3A-222	ENST00000630907	ICAM3	P32942	547 aa		29.62	■■■□□ 2.33
UBE3A-222	ENST00000630907	DUSP28	Q4G0W2	176 aa		29.62	■■■□□ 2.33
UBE3A-222	ENST00000630907	MCTP1	Q6DN14	999 aa		29.62	■■■□□ 2.33
UBE3A-222	ENST00000630907	GPRASP2	Q96D09	838 aa		29.62	■■■□□ 2.33
UBE3A-222	ENST00000630907	FAM205C	A6NFA0	338 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	SPATA31C2	B4DYI2	1134 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	ADCY6	O43306	1168 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	FIBP	O43427	364 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	TGFB3	P10600	412 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	SYT1	P21579	422 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	CIITA	P33076	1130 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	TMEM63B	Q5T3F8	832 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	CCDC62	Q6P9F0	684 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	LENG1	Q96BZ8	264 aa	Predicted RBP	29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	CDHR1	Q96JP9	859 aa		29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	DDX41	Q9UJV9	622 aa	Known RBP	29.61	■■■□□ 2.33
UBE3A-222	ENST00000630907	KIF28P	B7ZC32	967 aa		29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	MEIS1	O00470	390 aa		29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	NKRF	O15226	690 aa	Known RBP eCLIP	29.6	■■■□□ 2.33	2e-13	■■□□□ 11.6
UBE3A-222	ENST00000630907	EDIL3	O43854	480 aa		29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	DUSP11	O75319	330 aa	Known RBP	29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	ARIH2	O95376	493 aa		29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	U2AF2	P26368	475 aa	Known RBP eCLIP	29.6	■■■□□ 2.33	1e-8	■■■□□ 16.2
UBE3A-222	ENST00000630907	NEK8	Q86SG6	692 aa		29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	CYP2W1	Q8TAV3	490 aa		29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	GNE	Q9Y223	722 aa	Known RBP	29.6	■■■□□ 2.33
UBE3A-222	ENST00000630907	VPS37C	A5D8V6	355 aa	Predicted RBP	29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	FAM86B1	E9PN63	330 aa		29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	MAFG	O15525	162 aa		29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	SGPL1	O95470	568 aa		29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	FAM86B2	P0C5J1	330 aa		29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	ANP32A	P39687	249 aa	Known RBP	29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	SEMA3F	Q13275	785 aa		29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	MTMR1	Q13613	665 aa		29.59	■■■□□ 2.33
UBE3A-222	ENST00000630907	LY6K	Q17RY6	165 aa		29.59	■■■□□ 2.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms