RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 SURF1Q15526 300 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 MCTP2Q6DN12 878 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 POMZP3Q6PJE2 187 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 PLEKHH3Q7Z736 793 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 PLEKHO2Q8TD55 490 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 KLHL6Q8WZ60 621 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 NGRNQ9NPE2 291 aaKnown RBP5.67□□□□□ -1.5
CHD2-219ENST00000630016 DDX41Q9UJV9 622 aaKnown RBP5.67□□□□□ -1.5
CHD2-219ENST00000630016 AKT3Q9Y243 479 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 EFR3BQ9Y2G0 817 aa5.67□□□□□ -1.5
CHD2-219ENST00000630016 CEP164Q9UPV0 1460 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 ANKRD34BA5PLL1 514 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 PLS3P13797 630 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 SLC6A11P48066 632 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 SOX9P48436 509 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 ITGA1P56199 1179 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 RACK1P63244 317 aaKnown RBP5.66□□□□□ -1.5
CHD2-219ENST00000630016 SCRN1Q12765 414 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 PPP2R5EQ16537 467 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 C9orf131Q5VYM1 1079 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 TEX2Q8IWB9 1127 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 ZNF654Q8IZM8 581 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 COPS5Q92905 334 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 YIPF4Q9BSR8 244 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 BTG4Q9NY30 223 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 KIF21AQ7Z4S6 1674 aa5.66□□□□□ -1.5
CHD2-219ENST00000630016 SGSM2O43147 1006 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 KCNH1O95259 989 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 FSHBP01225 129 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 THBDP07204 575 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 KIAA1211LQ6NV74 962 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 VHLLQ6RSH7 139 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 FAM126BQ8IXS8 530 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 TXNDC5Q8NBS9 432 aaKnown RBP5.65□□□□□ -1.5
CHD2-219ENST00000630016 SLC16A11Q8NCK7 471 aa5.65□□□□□ -1.5
CHD2-219ENST00000630016 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
CHD2-219ENST00000630016 LCORQ96JN0 433 aaPredicted RBP5.65□□□□□ -1.5
CHD2-219ENST00000630016 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 C22orf46C9J442 243 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 NOP56O00567 594 aaKnown RBP5.64□□□□□ -1.51
CHD2-219ENST00000630016 SUV39H1O43463 412 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 LAMTOR5O43504 91 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 MROH9Q5TGP6 573 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 PRAMEF18Q5VWM3 479 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 MBLAC2Q68D91 279 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 MILR1Q7Z6M3 343 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 STK32CQ86UX6 486 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 FAM26EQ8N5C1 309 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 GPRASP2Q96D09 838 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 GPRC5CQ9NQ84 441 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 APEX2Q9UBZ4 518 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 ST6GALNAC2Q9UJ37 374 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 EMC9Q9Y3B6 208 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 CFTRP13569 1480 aa5.64□□□□□ -1.51
CHD2-219ENST00000630016 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.51
CHD2-219ENST00000630016 C6P13671 934 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 GDF5P43026 501 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 ZNF143P52747 638 aaPredicted RBP5.63□□□□□ -1.51
CHD2-219ENST00000630016 RPL11P62913 178 aaKnown RBP5.63□□□□□ -1.51
CHD2-219ENST00000630016 NKX3-2P78367 333 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 PRR31Q5SQ13 230 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 RIOX2Q8IUF8 465 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 BVESQ8NE79 360 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 RASGRP4Q8TDF6 673 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 DPF3Q92784 378 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 CDK5RAP1Q96SZ6 601 aaKnown RBP5.63□□□□□ -1.51
CHD2-219ENST00000630016 APBA2Q99767 749 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 SSBP3Q9BWW4 388 aaPredicted RBP5.63□□□□□ -1.51
CHD2-219ENST00000630016 FANCD2Q9BXW9 1451 aa5.63□□□□□ -1.51
CHD2-219ENST00000630016 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
CHD2-219ENST00000630016 TACR2P21452 398 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 FPR2P25090 351 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 STAT5AP42229 794 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 GTF2A2P52657 109 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 IQCEQ6IPM2 695 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 LIMS2Q7Z4I7 341 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 ZNF513Q8N8E2 541 aaPredicted RBP5.62□□□□□ -1.51
CHD2-219ENST00000630016 SH3RF3Q8TEJ3 882 aaPredicted RBP5.62□□□□□ -1.51
CHD2-219ENST00000630016 PPP1R14AQ96A00 147 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 TSC22D4Q9Y3Q8 395 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 ABCC8Q09428 1581 aa5.62□□□□□ -1.51
CHD2-219ENST00000630016 RIMBP3CA6NJZ7 1639 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 RIMBP3BA6NNM3 1639 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 SCAMP3O14828 347 aaKnown RBP5.61□□□□□ -1.51
CHD2-219ENST00000630016 MYO1BO43795 1136 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 ZNF28P17035 718 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 CASP7P55210 303 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 CHRNA2Q15822 529 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 INF2Q27J81 1249 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 E4F1Q66K89 784 aaPredicted RBP5.61□□□□□ -1.51
CHD2-219ENST00000630016 GTF2IRD2BQ6EKJ0 949 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 CYB5RLQ6IPT4 315 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 GTF2IRD2Q86UP8 949 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 TRIM59Q8IWR1 403 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 CPLX3Q8WVH0 158 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 SHDQ96IW2 340 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 SORCS2Q96PQ0 1159 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 IFT140Q96RY7 1462 aa5.61□□□□□ -1.51
CHD2-219ENST00000630016 WRNIP1Q96S55 665 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms